RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 SYPL1Q16563 259 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 GTDC1Q4AE62 458 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 COX20Q5RI15 118 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 PDZK1Q5T2W1 519 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 C1orf185Q5T7R7 199 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 ZNF585AQ6P3V2 769 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 DNAJC14Q6Y2X3 702 aaPredicted RBP8.46□□□□□ -1.06
CHD8-206ENST00000553870 B3GNT6Q6ZMB0 384 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 SPATA21Q7Z572 469 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 MRGPRGQ86SM5 289 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 PEX5LQ8IYB4 626 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 ULK2Q8IYT8 1036 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 GTPBP8Q8N3Z3 284 aaPredicted RBP8.46□□□□□ -1.06
CHD8-206ENST00000553870 ANKFN1Q8N957 763 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 OR5W2Q8NH69 310 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 RP9Q8TA86 221 aaKnown RBP8.46□□□□□ -1.06
CHD8-206ENST00000553870 PNPT1Q8TCS8 783 aaKnown RBP8.46□□□□□ -1.06
CHD8-206ENST00000553870 SLC38A5Q8WUX1 472 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 ASB5Q8WWX0 329 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 RND1Q92730 232 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 AURKBQ96GD4 344 aaPredicted RBP8.46□□□□□ -1.06
CHD8-206ENST00000553870 ELAC2Q9BQ52 826 aaKnown RBP8.46□□□□□ -1.06
CHD8-206ENST00000553870 SLC38A1Q9H2H9 487 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 ARMC7Q9H6L4 198 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 CACYBPQ9HB71 228 aaKnown RBP8.46□□□□□ -1.06
CHD8-206ENST00000553870 A4GALTQ9NPC4 353 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 EXOSC3Q9NQT5 275 aaKnown RBP8.46□□□□□ -1.06
CHD8-206ENST00000553870 ALKBH4Q9NXW9 302 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 COQ3Q9NZJ6 369 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 VAPAQ9P0L0 249 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.46□□□□□ -1.06
CHD8-206ENST00000553870 KCNE5Q9UJ90 142 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 SH3BGRL2Q9UJC5 107 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 IFT52Q9Y366 437 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 GPC6Q9Y625 555 aaPredicted RBP8.46□□□□□ -1.06
CHD8-206ENST00000553870 AP4B1Q9Y6B7 739 aa8.46□□□□□ -1.06
CHD8-206ENST00000553870 FREM3P0C091 2139 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 NPIPA5A0A0B4J1W7 369 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 OR2M5A3KFT3 312 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 NPIPA7E9PJI5 369 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 ETV2O00321 342 aaPredicted RBP8.45□□□□□ -1.06
CHD8-206ENST00000553870 ZNHIT1O43257 154 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 SNX3O60493 162 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 ZIC2O95409 532 aaPredicted RBP8.45□□□□□ -1.06
CHD8-206ENST00000553870 C1QCP02747 245 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 CHRM4P08173 479 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 LINGO3P0C6S8 592 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 NPIPA8P0DM63 369 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 ETS2P15036 469 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 IL7RP16871 459 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 PGCP20142 388 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 RPS4Y1P22090 263 aaKnown RBP8.45□□□□□ -1.06
CHD8-206ENST00000553870 FKBP2P26885 142 aaKnown RBP8.45□□□□□ -1.06
CHD8-206ENST00000553870 TIMP3P35625 211 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 PGM1P36871 562 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 SLC6A8P48029 635 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 LHX2P50458 406 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 SEC24CP53992 1094 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 DLX5P56178 289 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 GNGT1P63211 74 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 ADORA2A-AS1P86434 159 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 ZNF117Q03924 483 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 RBBP4Q09028 425 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 ART3Q13508 389 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 CBFBQ13951 182 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 NFYCQ13952 458 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 LARS2Q15031 903 aaKnown RBP8.45□□□□□ -1.06
CHD8-206ENST00000553870 MAPK11Q15759 364 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 MAPK14Q16539 360 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 MMEL1Q495T6 779 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 SLC25A53Q5H9E4 307 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 RIPPLY2Q5TAB7 128 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 RAET1LQ5VY80 246 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 NSUN5P2Q63ZY6 315 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 RTL6Q6ICC9 239 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 DHDDSQ86SQ9 333 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 LACC1Q8IV20 430 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 MSRB3Q8IXL7 192 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 ZNF440Q8IYI8 595 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 MEIOBQ8N635 442 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 ZNF614Q8N883 585 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 GATSQ8NAP1 163 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 PCYOX1LQ8NBM8 494 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 FAM71CQ8NEG0 241 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 GPR119Q8TDV5 335 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 ITLN2Q8WWU7 325 aaPredicted RBP8.45□□□□□ -1.06
CHD8-206ENST00000553870 TMEM234Q8WY98 164 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 ST8SIA1Q92185 356 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 SLC35B4Q969S0 331 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 ZG16BQ96DA0 208 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 MRGPRX4Q96LA9 322 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 ANKRD27Q96NW4 1050 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 CGREF1Q99674 301 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 TREX2Q9BQ50 279 aaPredicted RBP8.45□□□□□ -1.06
CHD8-206ENST00000553870 TTYH2Q9BSA4 534 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 TMEM38AQ9H6F2 299 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 MED17Q9NVC6 651 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 GID8Q9NWU2 228 aa8.45□□□□□ -1.06
CHD8-206ENST00000553870 PAQR5Q9NXK6 330 aaPredicted RBP8.45□□□□□ -1.06
CHD8-206ENST00000553870 FAM53CQ9NYF3 392 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms