RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 STX19Q8N4C7 294 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF615Q8N8J6 731 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF527Q8NB42 609 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 C17orf47Q8NEP4 570 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 OR4D9Q8NGE8 314 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 OR14A16Q8NHC5 309 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 GGHQ92820 318 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 DAZLQ92904 295 aaKnown RBP6.76□□□□□ -1.33
ATXN3-221ENST00000553498 ZG16BQ96DA0 208 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 LRFN5Q96NI6 719 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 UBL7Q96S82 380 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-221ENST00000553498 ITPAQ9BY32 194 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 SPRTNQ9H040 489 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-221ENST00000553498 OR10A5Q9H207 317 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 ANKRA2Q9H9E1 313 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 HHATLQ9HCP6 504 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF304Q9HCX3 659 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 LANCL2Q9NS86 450 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 SEMA4GQ9NTN9 838 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 TMEM74BQ9NUR3 256 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 MRPS18AQ9NVS2 196 aaKnown RBP6.76□□□□□ -1.33
ATXN3-221ENST00000553498 IL20Q9NYY1 176 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 ERVK-18Q9QC07 812 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 WARS2Q9UGM6 360 aaKnown RBP6.76□□□□□ -1.33
ATXN3-221ENST00000553498 MUTYHQ9UIF7 546 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 BAIAP2Q9UQB8 552 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 GPR55Q9Y2T6 319 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-221ENST00000553498 CHST2Q9Y4C5 530 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 CLDN16Q9Y5I7 305 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 C5orf42Q9H799 3197 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 C2orf92A0A1B0GVN3 265 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 TCRBV16S1A1N1A0A5B0 115 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 FRG2CA6NGY1 282 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 CPSF4LA6NMK7 179 aaKnown RBP6.75□□□□□ -1.33
ATXN3-221ENST00000553498 C17orf105B2RV13 164 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 TO15178 435 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 CHP2O43745 196 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 TPST2O60704 377 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 CPNE3O75131 537 aaKnown RBP6.75□□□□□ -1.33
ATXN3-221ENST00000553498 RCBTB2O95199 551 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 MED26O95402 600 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 CER1O95813 267 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 MT-ND2P03891 347 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 TP53P04637 393 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-221ENST00000553498 IFNA16P05015 189 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 NGFRP08138 427 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 SYPP08247 313 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 CSTF2P33240 577 aaKnown RBP eCLIP6.75□□□□□ -1.33
ATXN3-221ENST00000553498 PTGER1P34995 402 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 PEX19P40855 299 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 CAPZA2P47755 286 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 GPR143P51810 404 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 GP2P55259 537 aaKnown RBP6.75□□□□□ -1.33
ATXN3-221ENST00000553498 RHAGQ02094 409 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 PRKCDQ05655 676 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 DMWDQ09019 674 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 ST3GAL4Q11206 333 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 RAB40BQ12829 278 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 BNIP3Q12983 259 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 TRA2AQ13595 282 aaKnown RBP eCLIP6.75□□□□□ -1.33
ATXN3-221ENST00000553498 FGFBP1Q14512 234 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF267Q14586 743 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-221ENST00000553498 IRF3Q14653 427 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 GINS1Q14691 196 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 EXOSC7Q15024 291 aaKnown RBP6.75□□□□□ -1.33
ATXN3-221ENST00000553498 OR1Q1Q15612 314 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF528Q3MIS6 628 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 PLK5Q496M5 336 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 ARMC4Q5T2S8 1044 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 NKAIN2Q5VXU1 208 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 PLAG1Q6DJT9 500 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 RHBDD2Q6NTF9 364 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 ULK3Q6PHR2 472 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 TTLL10Q6ZVT0 673 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 TMPRSS11FQ6ZWK6 438 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 AHSA2Q719I0 299 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 NUP54Q7Z3B4 507 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 ARHGAP22Q7Z5H3 698 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 P2RY8Q86VZ1 359 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 CROCCP3Q8IVE0 287 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 C1orf210Q8IVY1 113 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 CCDC103Q8IW40 242 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 PLPP5Q8NEB5 264 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 B3GNT7Q8NFL0 401 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 OR2T33Q8NG76 320 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 OR1L3Q8NH93 324 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 TMEM163Q8TC26 289 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 BRIX1Q8TDN6 353 aaKnown RBP6.75□□□□□ -1.33
ATXN3-221ENST00000553498 UBASH3BQ8TF42 649 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 DNAJA4Q8WW22 397 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-221ENST00000553498 TMEM239Q8WW34 195 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 PIK3R3Q92569 461 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 CCDC74AQ96AQ1 378 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF501Q96CX3 271 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-221ENST00000553498 YIPF6Q96EC8 236 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 DTNBP1Q96EV8 351 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 TMEM80Q96HE8 168 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 PTCHD1Q96NR3 888 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 WFDC6Q9BQY6 131 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 FUNDC2Q9BWH2 189 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms