RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CTNNBL1Q8WYA6 563 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-210ENST00000553455 PSMG2Q969U7 264 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 FAHD2AQ96GK7 314 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 OR5M11Q96RB7 305 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 CITED1Q99966 193 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 OMDQ99983 421 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 TSSK1BQ9BXA7 367 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 GLT8D2Q9H1C3 349 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 PPDPFQ9H3Y8 114 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 SPRR3Q9UBC9 169 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 Q9UF83 564 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 MRPS7Q9Y2R9 242 aaKnown RBP3.86□□□□□ -1.79
SYNE2-210ENST00000553455 OARD1Q9Y530 152 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 MAGEB3O15480 346 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 SRSF10O75494 262 aaKnown RBP3.85□□□□□ -1.79
SYNE2-210ENST00000553455 HNF1AP20823 631 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 CD47Q08722 323 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 RAB40BQ12829 278 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 SLC1A5Q15758 541 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 NDUFA9Q16795 377 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 CCDC152Q4G0S7 254 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 SLC25A30Q5SVS4 291 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 APTXQ7Z2E3 356 aaKnown RBP3.85□□□□□ -1.79
SYNE2-210ENST00000553455 P2RY8Q86VZ1 359 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 CLDN19Q8N6F1 224 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 C15orf54Q8N8G6 183 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 ANKFN1Q8N957 763 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 STEAP2Q8NFT2 490 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 SLC5A11Q8WWX8 675 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 IL1F10Q8WWZ1 152 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 AMDHD1Q96NU7 426 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 PAXXQ9BUH6 204 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 RAB18Q9NP72 206 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 PAK1IP1Q9NWT1 392 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-210ENST00000553455 SMPD3Q9NY59 655 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-210ENST00000553455 SIGLEC8Q9NYZ4 499 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 RNF14Q9UBS8 474 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 RIMS3Q9UJD0 308 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 ZNF221Q9UK13 617 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 WDR45Q9Y484 360 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 FRMPD4Q14CM0 1322 aa3.85□□□□□ -1.79
SYNE2-210ENST00000553455 LOC100131303A0A0U1RQF7 123 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 A0A1W2PNV4 684 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 PP2D1A8MPX8 630 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 G3V4G9 280 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 OR7A17O14581 309 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 MSH4O15457 936 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 GPX5O75715 221 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 CD80P33681 288 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 PRPHP41219 470 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 GBX2P52951 348 aaPredicted RBP3.84□□□□□ -1.79
SYNE2-210ENST00000553455 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 SPIBQ01892 262 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 GPM6BQ13491 265 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 CFAP157Q5JU67 520 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 SPINK14Q6IE38 97 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 FAM199XQ6PEV8 388 aaPredicted RBP3.84□□□□□ -1.79
SYNE2-210ENST00000553455 Q6ZR54 194 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 ZNF683Q8IZ20 524 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 AENQ8WTP8 325 aaKnown RBP3.84□□□□□ -1.79
SYNE2-210ENST00000553455 RLN3Q8WXF3 142 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 PELI1Q96FA3 418 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 NOL4LQ96MY1 436 aaPredicted RBP3.84□□□□□ -1.79
SYNE2-210ENST00000553455 OR5B2Q96R09 309 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 GLIPR2Q9H4G4 154 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 GORASP2Q9H8Y8 452 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 CAB39LQ9H9S4 337 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 SLC7A10Q9NS82 523 aa3.84□□□□□ -1.79
SYNE2-210ENST00000553455 GPR89AB7ZAQ6 455 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 PHOX2AO14813 284 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 H2BFMP0C1H6 154 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 GPR89BP0CG08 455 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 GLRA2P23416 452 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 TAF6P49848 677 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 MEOX2P50222 304 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 AP3M2P53677 418 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 KRTAP10-6P60371 365 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-210ENST00000553455 UBE2HP62256 183 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 RPL32P62910 135 aaKnown RBP3.83□□□□□ -1.8
SYNE2-210ENST00000553455 CHIT1Q13231 466 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 MXD4Q14582 209 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-210ENST00000553455 ZNF239Q16600 458 aaKnown RBP3.83□□□□□ -1.8
SYNE2-210ENST00000553455 GSG1Q2KHT4 349 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 C10orf120Q5SQS8 335 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 MARC1Q5VT66 337 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 VITQ6UXI7 678 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 ACOT1Q86TX2 421 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 SLC38A6Q8IZM9 456 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 CD177Q8N6Q3 437 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 SYT14Q8NB59 555 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 STXBP6Q8NFX7 210 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 OR51G2Q8NGK0 314 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 BADQ92934 168 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 EMG1Q92979 244 aaKnown RBP3.83□□□□□ -1.8
SYNE2-210ENST00000553455 SH3YL1Q96HL8 342 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-210ENST00000553455 CELF6Q96J87 481 aaKnown RBP3.83□□□□□ -1.8
SYNE2-210ENST00000553455 MCHR1Q99705 422 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 DEFB126Q9BYW3 111 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 ABCD2Q9UBJ2 740 aa3.83□□□□□ -1.8
SYNE2-210ENST00000553455 TBK1Q9UHD2 729 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms