RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 UMODP07911 640 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 IGFBP1P08833 259 aaPredicted RBP17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 TBXA2RP21731 343 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 LCN1P31025 176 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 NUP107P57740 925 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 CD226Q15762 336 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 ZNF613Q6PF04 617 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 HSDL2Q6YN16 418 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 LSRQ86X29 649 aaPredicted RBP17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 LSMEM1Q8N8F7 131 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 ADNPQ9H2P0 1102 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 LIN28AQ9H9Z2 209 aaKnown RBP17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 C19orf25Q9UFG5 118 aaPredicted RBP17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 SLC35A3Q9Y2D2 325 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 LOC102723996A0A087X1L8 192 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 A0A0B4J2E0 115 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 A0A1B0GX12 115 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 A0A1W2PNU3 283 aaPredicted RBP17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 C9J4A7 227 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 REM1O75628 298 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 STK17BO94768 372 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 SOX14O95416 240 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 HLCSP50747 726 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 TUBA4AP68366 448 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 TMEM236Q5W0B7 351 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 MBOAT2Q6ZWT7 520 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 ZNF550Q7Z398 422 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 PIP4P1Q86T03 277 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 MEX3DQ86XN8 651 aaKnown RBP17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 SLC34A3Q8N130 599 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 ZNF527Q8NB42 609 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 APH1BQ8WW43 257 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 TP53INP1Q96A56 240 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 OMA1Q96E52 524 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 VMP1Q96GC9 406 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 RNF6Q9Y252 685 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 EP300Q09472 2414 aaPredicted RBP17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 ICOSLGO75144 302 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 WBP4O75554 376 aaKnown RBP17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 MT-CO3P00414 261 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 IFNGR2P38484 337 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 RPL5P46777 297 aaKnown RBP17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 ALDH6A1Q02252 535 aaKnown RBP17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 PLCXD2Q0VAA5 305 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 NRMQ8IXM6 262 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 NUBPLQ8TB37 319 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 FAM81AQ8TBF8 368 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 ZNF566Q969W8 418 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 TAAR9Q96RI9 348 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 ZPBPQ9BS86 351 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 TMEM27Q9HBJ8 222 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 RASSF1Q9NS23 344 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 TUBA8Q9NY65 449 aaPredicted RBP17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 NCDNQ9UBB6 729 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 PISDQ9UG56 409 aa17.97■□□□□ 0.47
RBFOX1-215ENST00000553186 TMEM200CA6NKL6 621 aa17.96■□□□□ 0.47
RBFOX1-215ENST00000553186 SLC1A7O00341 560 aa17.96■□□□□ 0.47
RBFOX1-215ENST00000553186 KLF4O43474 513 aa17.96■□□□□ 0.47
RBFOX1-215ENST00000553186 POU1F1P28069 291 aa17.96■□□□□ 0.47
RBFOX1-215ENST00000553186 IL12BP29460 328 aa17.96■□□□□ 0.47
RBFOX1-215ENST00000553186 IDH2P48735 452 aaKnown RBP17.96■□□□□ 0.47
RBFOX1-215ENST00000553186 SLC26A5P58743 744 aa17.96■□□□□ 0.47
RBFOX1-215ENST00000553186 DHRS13Q6UX07 377 aa17.96■□□□□ 0.47
RBFOX1-215ENST00000553186 RRM2BQ7LG56 351 aa17.96■□□□□ 0.47
RBFOX1-215ENST00000553186 PIGXQ8TBF5 258 aa17.96■□□□□ 0.47
RBFOX1-215ENST00000553186 GNPDA2Q8TDQ7 276 aa17.96■□□□□ 0.47
RBFOX1-215ENST00000553186 DDA1Q9BW61 102 aa17.96■□□□□ 0.47
RBFOX1-215ENST00000553186 CNIH4Q9P003 139 aa17.96■□□□□ 0.47
RBFOX1-215ENST00000553186 PTRH2Q9Y3E5 179 aaKnown RBP17.96■□□□□ 0.47
RBFOX1-215ENST00000553186 A0A087WXM4 84 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 A0A1B0GWA3 101 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 SCDO00767 359 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 ANGPTL1O95841 491 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 CCDC159P0C7I6 412 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 HPGDP15428 266 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 GSTM3P21266 225 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 PNLIPRP2P54317 469 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 CXCR4P61073 352 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 TSPAN31Q12999 210 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 C16orf47Q6ZP98 133 aaPredicted RBP17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 GATSQ8NAP1 163 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 RHOXF1Q8NHV9 184 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 SGCDQ92629 289 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 FAM46AQ96IP4 442 aaKnown RBP17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 PHOX2BQ99453 314 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 RTN4RQ9BZR6 473 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 SPRY4Q9C004 299 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 TRIM2Q9C040 744 aa17.96■□□□□ 0.46
RBFOX1-215ENST00000553186 PIP5K1CO60331 668 aa17.95■□□□□ 0.46
RBFOX1-215ENST00000553186 NGFRP08138 427 aa17.95■□□□□ 0.46
RBFOX1-215ENST00000553186 GABRB1P18505 474 aa17.95■□□□□ 0.46
RBFOX1-215ENST00000553186 FMO3P31513 532 aa17.95■□□□□ 0.46
RBFOX1-215ENST00000553186 NR1H2P55055 460 aa17.95■□□□□ 0.46
RBFOX1-215ENST00000553186 PSPHP78330 225 aa17.95■□□□□ 0.46
RBFOX1-215ENST00000553186 TRIP6Q15654 476 aaKnown RBP17.95■□□□□ 0.46
RBFOX1-215ENST00000553186 POGLUT1Q8NBL1 392 aa17.95■□□□□ 0.46
RBFOX1-215ENST00000553186 OR2Y1Q8NGV0 311 aa17.95■□□□□ 0.46
RBFOX1-215ENST00000553186 OR8K3Q8NH51 312 aa17.95■□□□□ 0.46
RBFOX1-215ENST00000553186 ZNF226Q9NYT6 803 aa17.95■□□□□ 0.46
RBFOX1-215ENST00000553186 TRBV11-1A0A0K0K1C0 115 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms