RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 CACYBPQ9HB71 228 aaKnown RBP16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 MED17Q9NVC6 651 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 CALML5Q9NZT1 146 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 LEF1Q9UJU2 399 aaPredicted RBP16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 PCDHB14Q9Y5E9 798 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 CLIC1O00299 241 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 ZNF264O43296 627 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 UGT2B17O75795 530 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 CSTAP01040 98 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 ETFAP13804 333 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 CPN1P15169 458 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 ZNF17P17021 662 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 CHRNB4P30926 498 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 LHX2P50458 406 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 P2RX1P51575 399 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 B3GALT5-AS1P59052 145 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 CHRNEQ04844 493 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 FADDQ13158 208 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 GNA13Q14344 377 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 SYPL1Q16563 259 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 LRIF1Q5T3J3 769 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 LRRC74BQ6ZQY2 392 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 EIF3MQ7L2H7 374 aaKnown RBP16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 UBQLNLQ8IYU4 475 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 TOR1AIP2Q8NFQ8 470 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 ZPLD1Q8TCW7 415 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 ZNF385DQ9H6B1 395 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 KLHL14Q9P2G3 628 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 RNF6Q9Y252 685 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 SLC35A3Q9Y2D2 325 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 NDUFAF1Q9Y375 327 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 KLF2Q9Y5W3 355 aaPredicted RBP16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 COL12A1Q99715 3063 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 PCNX3Q9H6A9 2034 aa16.72■□□□□ 0.27
PRPF40B-216ENST00000552301 SEC14L5O43304 696 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 EIF4E2O60573 245 aaKnown RBP16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 EPPINO95925 133 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 CHRM4P08173 479 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 ZNF708P17019 499 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 ME2P23368 584 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 CRISP3P54108 245 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 CLDN18P56856 261 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 EEFSECP57772 596 aaKnown RBP16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 BCL2A1Q16548 175 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 PLPPR5Q32ZL2 321 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 NDUFAF6Q330K2 333 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 PAGE3Q5JUK9 113 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 RIPPLY2Q5TAB7 128 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 NSUN5P2Q63ZY6 315 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 CGB2Q6NT52 195 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 CCDC71Q8IV32 467 aaPredicted RBP16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 TSPEARQ8WU66 669 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 SAP130Q9H0E3 1048 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 CORO2BQ9UQ03 480 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 L3MBTL1Q9Y468 752 aa16.71■□□□□ 0.27
PRPF40B-216ENST00000552301 CACNA1CQ13936 2221 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 ARHGAP21Q5T5U3 1957 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 CENPVL1A0A0U1RR11 272 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 PRAMEF27A3QJZ7 478 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 CD8B2A6NJW9 211 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 FAM90A27PA6NNH2 459 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 EVPLLA8MZ36 301 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 SHISA8B8ZZ34 492 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 OIP5O43482 229 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 IL2RAP01589 272 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 BCHEP06276 602 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 SNRPB2P08579 225 aaKnown RBP16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 UBTFL6P0CB48 400 aaPredicted RBP16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 HTR1EP28566 365 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 EIF1P41567 113 aaKnown RBP16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 MVDP53602 400 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 RPS3AP61247 264 aaKnown RBP16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 CBFBQ13951 182 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 FGFBP1Q14512 234 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 RGNQ15493 299 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 CBLN3Q6UW01 205 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 DHDDSQ86SQ9 333 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 PEX5LQ8IYB4 626 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 GTPBP8Q8N3Z3 284 aaPredicted RBP16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 OR5W2Q8NH69 310 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 RNF145Q96MT1 663 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 ZNF317Q96PQ6 595 aaPredicted RBP16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 TUBA1CQ9BQE3 449 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 LAT2Q9GZY6 243 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 SLC38A1Q9H2H9 487 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 CALHM2Q9HA72 323 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 KCNE5Q9UJ90 142 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 ICAM5Q9UMF0 924 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 ZNF337Q9Y3M9 751 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 AP4B1Q9Y6B7 739 aa16.7■□□□□ 0.26
PRPF40B-216ENST00000552301 C7orf72A4D263 438 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 CLCA1A8K7I4 914 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 HSPB2A8KAH6 182 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 C5orf58C9J3I9 102 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 FOXF1Q12946 379 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 MAPRE2Q15555 327 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 HSPB2Q16082 182 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 MAPK14Q16539 360 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms