RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 BTBD2Q9BX70 525 aa11.46□□□□□ -0.57
PTCH1-221ENST00000550914 DUSP22Q9NRW4 184 aa11.46□□□□□ -0.57
PTCH1-221ENST00000550914 OXSMQ9NWU1 459 aa11.46□□□□□ -0.57
PTCH1-221ENST00000550914 GIN1Q9NXP7 522 aa11.46□□□□□ -0.57
PTCH1-221ENST00000550914 RNF115Q9Y4L5 304 aa11.46□□□□□ -0.57
PTCH1-221ENST00000550914 ACTL7BQ9Y614 415 aa11.46□□□□□ -0.57
PTCH1-221ENST00000550914 ALPK2Q86TB3 2170 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 KIF2AO00139 706 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-221ENST00000550914 PLIN3O60664 434 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 CRLF1O75462 422 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 SDC1P18827 310 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 ASMTP46597 345 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 CCT5P48643 541 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 PRIM2P49643 509 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 SUMO3P55854 103 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-221ENST00000550914 KRTAP1-1Q07627 177 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 P2RY6Q15077 328 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 ZNF385BQ569K4 471 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 HEPHL1Q6MZM0 1159 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 ANKRD26P1Q6NSI1 321 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 FIGNL1Q6PIW4 674 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 TFAP2EQ6VUC0 442 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 Q6ZSR9 355 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 CXXC5Q7LFL8 322 aaKnown RBP11.45□□□□□ -0.58
PTCH1-221ENST00000550914 SZRD1Q7Z422 152 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 R3HCC1LQ7Z5L2 792 aaKnown RBP11.45□□□□□ -0.58
PTCH1-221ENST00000550914 ZAR1Q86SH2 424 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 GATSQ8NAP1 163 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 LRRN4CLQ8ND94 238 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 HSD17B8Q92506 261 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 FBXW5Q969U6 566 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 S100PBPQ96BU1 408 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 TRMT61AQ96FX7 289 aaKnown RBP11.45□□□□□ -0.58
PTCH1-221ENST00000550914 SH3YL1Q96HL8 342 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-221ENST00000550914 TRMOQ9BU70 441 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 TXLNGYQ9BZA5 131 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 HOXD1Q9GZZ0 328 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 ESRP2Q9H6T0 727 aaKnown RBP11.45□□□□□ -0.58
PTCH1-221ENST00000550914 C12orf49Q9H741 205 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 TMEM185BQ9H7F4 350 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 SH3BP4Q9P0V3 963 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 KLHL13Q9P2N7 655 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 TBK1Q9UHD2 729 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 ADAM21Q9UKJ8 722 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 LAMP3Q9UQV4 416 aa11.45□□□□□ -0.58
PTCH1-221ENST00000550914 A0A1W2PPM1 405 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 AZIN1O14977 448 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 OPN1LWP04000 364 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 CD3EP07766 207 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 DANCRP0C864 163 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 CPA3P15088 417 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 IL32P24001 234 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 CRHR1P34998 444 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 IDUAP35475 653 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 POU6F2P78424 691 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-221ENST00000550914 CD226Q15762 336 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 CLEC12BQ2HXU8 276 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 NCMAPQ5T1S8 102 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 SFRP5Q5T4F7 317 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 LIPMQ5VYY2 423 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 CLEC6AQ6EIG7 209 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 LRIG3Q6UXM1 1119 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 SSX8Q7RTT4 187 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 TDRPQ86YL5 185 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 SLC43A2Q8N370 569 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 ZNF527Q8NB42 609 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 LILRB1Q8NHL6 650 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-221ENST00000550914 FBXO30Q8TB52 745 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 RAB3IL1Q8TBN0 382 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 ABHD3Q8WU67 409 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 ROBO4Q8WZ75 1007 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 TSSK3Q96PN8 268 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 L2HGDHQ9H9P8 463 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 PPCSQ9HAB8 311 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 FBXO34Q9NWN3 711 aa11.44□□□□□ -0.58
PTCH1-221ENST00000550914 GPC6Q9Y625 555 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-221ENST00000550914 ANK3Q12955 4377 aaKnown RBP11.44□□□□□ -0.58
PTCH1-221ENST00000550914 H3BNH8 94 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 ZNF195O14628 629 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 LSM1O15116 133 aaKnown RBP11.43□□□□□ -0.58
PTCH1-221ENST00000550914 AKAP10O43572 662 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 PRKD3O94806 890 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 CHEK2O96017 543 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 HMGN2P05204 90 aaKnown RBP11.43□□□□□ -0.58
PTCH1-221ENST00000550914 FESP07332 822 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 YES1P07947 543 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 THBS1P07996 1170 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 SFTPDP35247 375 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 RPL3P39023 403 aaKnown RBP11.43□□□□□ -0.58
PTCH1-221ENST00000550914 P2RX1P51575 399 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 ZNF117Q03924 483 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 DMTNQ08495 405 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 FOXF1Q12946 379 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 TAB1Q15750 504 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 RFTN2Q52LD8 501 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-221ENST00000550914 KLHL26Q53HC5 615 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 CCNJQ5T5M9 372 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 FCRLAQ7L513 359 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 TUSC5Q8IXB3 177 aa11.43□□□□□ -0.58
PTCH1-221ENST00000550914 OR2T11Q8NH01 316 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms