RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 DVL2O14641 736 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 EEF1E1O43324 174 aaKnown RBP8.8□□□□□ -1
HDAC7-229ENST00000549883 UGT2B17O75795 530 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 TNFSF13O75888 250 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 AQP8O94778 261 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 RCBTB2O95199 551 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 PGRP06401 933 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 LINGO3P0C6S8 592 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 HPGDP15428 266 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 CTSSP25774 331 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 IDH3AP50213 366 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 PLAURQ03405 335 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 FOXF1Q12946 379 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 GANABQ14697 944 aaKnown RBP8.8□□□□□ -1
HDAC7-229ENST00000549883 MAPK11Q15759 364 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 BCL2A1Q16548 175 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 ARHGAP11BQ3KRB8 267 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 PDCD4Q53EL6 469 aaKnown RBP8.8□□□□□ -1
HDAC7-229ENST00000549883 TYW3Q6IPR3 259 aaKnown RBP8.8□□□□□ -1
HDAC7-229ENST00000549883 VWA1Q6PCB0 445 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 ZNF621Q6ZSS3 439 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 GRAMD2AQ8IUY3 354 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 KIRREL3Q8IZU9 778 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 GTPBP8Q8N3Z3 284 aaPredicted RBP8.8□□□□□ -1
HDAC7-229ENST00000549883 ANKFN1Q8N957 763 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 RFWD2Q8NHY2 731 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 FNDC9Q8TBE3 224 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 LRRC8CQ8TDW0 803 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 NRGNQ92686 78 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 VPS33AQ96AX1 596 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 NEURL3Q96EH8 262 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 AURKBQ96GD4 344 aaPredicted RBP8.8□□□□□ -1
HDAC7-229ENST00000549883 C7orf26Q96N11 449 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 PANX1Q96RD7 426 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 PIGQQ9BRB3 760 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 ZNF350Q9GZX5 532 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 SDR39U1Q9NRG7 319 aaPredicted RBP8.8□□□□□ -1
HDAC7-229ENST00000549883 ZNF446Q9NWS9 450 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 JKAMPQ9P055 326 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 ZNF629Q9UEG4 869 aaPredicted RBP8.8□□□□□ -1
HDAC7-229ENST00000549883 BTNL2Q9UIR0 455 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 PCDHGB4Q9UN71 923 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 DTNAQ9Y4J8 743 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 CSMD2Q7Z408 3487 aa8.8□□□□□ -1
HDAC7-229ENST00000549883 LRBAP50851 2863 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 A0A1W2PNV4 684 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 SERINC4A6NH21 518 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 SLC22A20A6NK97 555 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 FAM47E-STBD1D6RA91 191 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 SYT5O00445 386 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 EIF1AYO14602 144 aaKnown RBP8.79□□□□□ -1
HDAC7-229ENST00000549883 UBDO15205 165 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 ADAM11O75078 769 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 STX11O75558 287 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 SLC22A3O75751 556 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 KRT16P08779 473 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 IDO1P14902 403 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 KLK2P20151 261 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 LCN1P31025 176 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 CHI3L1P36222 383 aaPredicted RBP8.79□□□□□ -1
HDAC7-229ENST00000549883 ASCL1P50553 236 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 MVDP53602 400 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 PPP2R2AP63151 447 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 SIRPAP78324 504 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 CHRNEQ04844 493 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 MYBPHQ13203 477 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 SKP2Q13309 424 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 PON3Q15166 354 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 ZNF141Q15928 474 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 SYPL1Q16563 259 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 FBXL19-AS1Q494R0 122 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 GLYR1Q49A26 553 aaPredicted RBP8.79□□□□□ -1
HDAC7-229ENST00000549883 BHLHB9Q6PI77 547 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 FRRS1Q6ZNA5 592 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 C16orf62Q7Z3J2 963 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 BTLAQ7Z6A9 289 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 LUZP2Q86TE4 346 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 FUNDC1Q8IVP5 155 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 ZZZ3Q8IYH5 903 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 MEIOBQ8N635 442 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 OR10D3Q8NH80 312 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 FBXO27Q8NI29 283 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 GPR119Q8TDV5 335 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 ROPN1LQ96C74 230 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 C14orf79Q96F83 325 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 ADGRG7Q96K78 797 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 TM9SF2Q99805 663 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 RUBCNLQ9H714 662 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 VIPAS39Q9H9C1 493 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 CRIM1Q9NZV1 1036 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 AP4B1Q9Y6B7 739 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 SPG11Q96JI7 2443 aa8.79□□□□□ -1
HDAC7-229ENST00000549883 ABCA4P78363 2273 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 DUXAA6NLW8 204 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 HMGB1P1B2RPK0 211 aaPredicted RBP8.78□□□□□ -1
HDAC7-229ENST00000549883 GTPBP1O00178 669 aaKnown RBP8.78□□□□□ -1
HDAC7-229ENST00000549883 TNFSF11O14788 317 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 CXCL13O43927 109 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 KIAA0513O60268 411 aa8.78□□□□□ -1
HDAC7-229ENST00000549883 CYP7B1O75881 506 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms