RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ZNF19P17023 458 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 TEAD1P28347 426 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 NOS3P29474 1203 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 ACSL1P33121 698 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 BTG1P62324 171 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 SLC36A2Q495M3 483 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 THSD4Q6ZMP0 1018 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 CCDC28AQ8IWP9 274 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 SHISA5Q8N114 240 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 LRRC17Q8N6Y2 441 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 MRPL43Q8N983 215 aaKnown RBP13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 BEST4Q8NFU0 473 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR52E1Q8NGJ3 308 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 ANGPTL6Q8NI99 470 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 PTP4A1Q93096 173 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 GHITMQ9H3K2 345 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 TRIM36Q9NQ86 728 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 MOSPD1Q9UJG1 213 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 ZMIZ1Q9ULJ6 1067 aa13.15□□□□□ -0.31
RAPGEF3-218ENST00000548919 NPIPA5A0A0B4J1W7 369 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 A0A0G2JK05 382 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 UNC119BA6NIH7 251 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 NPIPA7E9PJI5 369 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 MAGEB4O15481 346 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 FZD7O75084 574 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 SOX30O94993 753 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR5F1O95221 314 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 GYPBP06028 91 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 NPIPA8P0DM63 369 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 NPR2P20594 1047 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 GIFP27352 417 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 RBMS1P29558 406 aaKnown RBP13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 RFX3P48380 749 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 CCR6P51684 374 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 SRP54P61011 504 aaKnown RBP13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 ERVK-21P61565 698 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 MAPK14Q16539 360 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 ZBTB37Q5TC79 503 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 PRPF38BQ5VTL8 546 aaKnown RBP13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 CDC73Q6P1J9 531 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 RAB42Q8N4Z0 105 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 CYB561A3Q8NBI2 242 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 TTLQ8NG68 377 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR6C4Q8NGE1 309 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR4D9Q8NGE8 314 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 MOAP1Q96BY2 351 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 C4orf36Q96KX1 117 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 ZFP3Q96NJ6 502 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 PRSS27Q9BQR3 290 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 BEX1Q9HBH7 125 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 SIDT1Q9NXL6 827 aaKnown RBP13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 DEC1Q9P2X7 70 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 WDR45Q9Y484 360 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 INSL6Q9Y581 213 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 FGF19O95750 216 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 PAK4O96013 591 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 IL9P15248 144 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 HTR2AP28223 471 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 PEBP1P30086 187 aaKnown RBP13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 WASP42768 502 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 ZNF136P52737 540 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR12D2P58182 307 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR8H3Q8N146 312 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 SIX5Q8N196 739 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR2L3Q8NG85 312 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 ABHD4Q8TB40 342 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 NR4A3Q92570 626 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 C1QTNF2Q9BXJ5 285 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 PIGUQ9H490 435 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 CALML5Q9NZT1 146 aa13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 MRPS23Q9Y3D9 190 aaKnown RBP13.14□□□□□ -0.31
RAPGEF3-218ENST00000548919 ATG2BQ96BY7 2078 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 BHLHE40O14503 412 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 DHFRP00374 187 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 STOMP27105 288 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 PKLRP30613 574 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 HCCSP53701 268 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 PER3P56645 1201 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 DGCR2P98153 550 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 GALEQ14376 348 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 DUSP5Q16690 384 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 GAB4Q2WGN9 574 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 ESCO2Q56NI9 601 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 MFSD12Q6NUT3 480 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 SPRED2Q7Z698 418 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 GID4Q8IVV7 300 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 SLC38A6Q8IZM9 456 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 RFLNBQ8N5W9 214 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 OR13C2Q8NGS9 318 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 ZNF296Q8WUU4 475 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 SCMH1Q96GD3 660 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 TRAF4Q9BUZ4 470 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 JAM3Q9BX67 310 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 UCKL1Q9NWZ5 548 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 ING4Q9UNL4 249 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 PTPRSQ13332 1948 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 TEX13CA0A0J9YWL9 993 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 A0A1W2PRG6 482 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 BTN3A3O00478 584 aa13.13□□□□□ -0.31
RAPGEF3-218ENST00000548919 DNAJB6O75190 326 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms