RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 FAM74A3Q4VXF1 159 aa2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 ARSKQ6UWY0 536 aa2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 CATSPER4Q7RTX7 472 aa2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 ZNF100Q8IYN0 542 aa2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 GCNT2Q8N0V5 402 aa2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 OR2T33Q8NG76 320 aa2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 AENQ8WTP8 325 aaKnown RBP2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 RNF138Q8WVD3 245 aa2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 NOL4LQ96MY1 436 aaPredicted RBP2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 TESK2Q96S53 571 aa2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 FANCFQ9NPI8 374 aa2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 MARCH5Q9NX47 278 aa2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 RIMS3Q9UJD0 308 aa2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 ODF2LQ9ULJ1 636 aa2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 USP16Q9Y5T5 823 aa2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 CHD4Q14839 1912 aa2.81□□□□□ -1.96
DEPDC4-205ENST00000548313 IGHV1OR15-1A0A075B7D0 117 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 F8WDY8 70 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 JAK2O60674 1132 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 MMP23AO75900 390 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 PTBP3O95758 552 aaKnown RBP2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 TNNI3P19429 210 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 PAICSP22234 425 aaKnown RBP2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 PSMA2P25787 234 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 BTDP43251 543 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 LIM2P55344 173 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 PSG7Q13046 419 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 TRIP10Q15642 601 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 NDUFA9Q16795 377 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 LINC01620Q4KN68 170 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 UNC5DQ6UXZ4 953 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 RNF175Q8N4F7 328 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 C15orf54Q8N8G6 183 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 ZBTB44Q8NCP5 570 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 LINC00167Q96N53 147 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 OR5B2Q96R09 309 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 WRAP73Q9P2S5 460 aaPredicted RBP2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 ZNF221Q9UK13 617 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 CHMP2BQ9UQN3 213 aa2.8□□□□□ -1.96
DEPDC4-205ENST00000548313 LOC100131303A0A0U1RQF7 123 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 PINLYPA6NC86 204 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 TRIM49D1C9J1S8 452 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 CLDN5O00501 218 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 OR4F21O95013 312 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 OR8U8P0C7N1 319 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 NR2C1P13056 603 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 ST3GAL3Q11203 375 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 SCGB2A2Q13296 93 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 TMEM52BQ4KMG9 183 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 CELF3Q5SZQ8 465 aaKnown RBP2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 C12orf60Q5U649 245 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 FAHD2BQ6P2I3 314 aaPredicted RBP2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 WDR74Q6RFH5 385 aaPredicted RBP2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 APTXQ7Z2E3 356 aaKnown RBP2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 ZNF589Q86UQ0 364 aaPredicted RBP2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 SKA3Q8IX90 412 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 CCDC71LQ8N9Z2 235 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 LINC01555Q8NAE3 123 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 SLC5A11Q8WWX8 675 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 TAF4BQ92750 862 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 FAHD2AQ96GK7 314 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 AKR1E2Q96JD6 320 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 GPA33Q99795 319 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 DUSP16Q9BY84 665 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 MRPL13Q9BYD1 178 aaKnown RBP2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 SRXN1Q9BYN0 137 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 DHX33Q9H6R0 707 aaKnown RBP2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 PAK1IP1Q9NWT1 392 aaPredicted RBP2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 CD274Q9NZQ7 290 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 ANAPC7Q9UJX3 599 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 B9D1Q9UPM9 204 aa2.79□□□□□ -1.96
DEPDC4-205ENST00000548313 IGKV6D-21A0A0A0MT36 114 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 PPIAL4CA0A0B4J2A2 164 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 TUBAL3A6NHL2 446 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 SDHDO14521 159 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 CHADO15335 359 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 EFNA2O43921 213 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 TRIM16O95361 564 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 TIMP1P01033 207 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 IGHV3-48P01763 117 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 HPNP05981 417 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 PPIAL4GP0DN37 164 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 FUT3P21217 361 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 CAMLGP49069 296 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 SLC10A7Q0GE19 358 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 Q6ZVH6 145 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 LCA5Q86VQ0 697 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 TMEM17Q86X19 198 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 ALLCQ8N6M5 410 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 OR2AP1Q8NGE2 309 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 CNIH3Q8TBE1 160 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 SELENOMQ8WWX9 145 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 MYLPFQ96A32 169 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 ZNF799Q96GE5 643 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 TXN2Q99757 166 aa2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 CRNKL1Q9BZJ0 848 aaKnown RBP2.78□□□□□ -1.96
DEPDC4-205ENST00000548313 CHIAQ9BZP6 476 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms