RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 NPIPA8P0DM63 369 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 ADORA3P0DMS8 318 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 PPIAL4FP0DN26 164 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 NCK1P16333 377 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 PTBP1P26599 531 aaKnown RBP eCLIP3.63□□□□□ -1.83
SCAF11-210ENST00000547654 SOX3P41225 446 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 CASP4P49662 377 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 XGP55808 180 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 PEX3P56589 373 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 RGS8P57771 180 aaPredicted RBP3.63□□□□□ -1.83
SCAF11-210ENST00000547654 BDH1Q02338 343 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 GUCY2DQ02846 1103 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 MECOMQ03112 1051 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 ENPEPQ07075 957 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 MERTKQ12866 999 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 TAB1Q15750 504 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 UBE2V2Q15819 145 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 SGSM1Q2NKQ1 1148 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 C6orf226Q5I0X4 101 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 OR4F3Q6IEY1 312 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 RHBDD2Q6NTF9 364 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 NEPROQ6NW34 567 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 SLC25A47Q6Q0C1 308 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 TMEM107Q6UX40 140 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 LANCL3Q6ZV70 420 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 LUZP2Q86TE4 346 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 TBC1D10CQ8IV04 446 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 OR4N5Q8IXE1 308 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 CHDHQ8NE62 594 aaPredicted RBP3.63□□□□□ -1.83
SCAF11-210ENST00000547654 FAM83FQ8NEG4 500 aaPredicted RBP3.63□□□□□ -1.83
SCAF11-210ENST00000547654 OR4F17Q8NGA8 305 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 OR10G8Q8NGN5 311 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 OR4F5Q8NH21 305 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 OR6S1Q8NH40 331 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 OR1F12Q8NHA8 337 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 SCFD1Q8WVM8 642 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 FCAMRQ8WWV6 532 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 ART4Q93070 314 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 CAPNS2Q96L46 248 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 PGLYRP2Q96PD5 576 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 OR4F4Q96R69 305 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 CENPKQ9BS16 269 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 COMMD4Q9H0A8 199 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 AUNIPQ9H7T9 357 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 PLEKHA3Q9HB20 300 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 POLE4Q9NR33 117 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 CHRAC1Q9NRG0 131 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 MAN2C1Q9NTJ4 1040 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 KLHL28Q9NXS3 571 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 GCNT4Q9P109 453 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 PISDQ9UG56 409 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 ZNF639Q9UID6 485 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 LNPEPQ9UIQ6 1025 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 NPIPA1Q9UND3 350 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 PPIAL4AQ9Y536 164 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 ALG6Q9Y672 507 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 SLIT1O75093 1534 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 ASXL1Q8IXJ9 1541 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 ADGRB2O60241 1585 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 TNRQ92752 1358 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 USP32Q8NFA0 1604 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 KIF27Q86VH2 1401 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 DLC1Q96QB1 1528 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 A0A0A6YYD4 124 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 INPP4BO15327 924 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 RANBP6O60518 1105 aaKnown RBP3.62□□□□□ -1.83
SCAF11-210ENST00000547654 UPK3AO75631 287 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 CLDN9O95484 217 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 NGFP01138 241 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 ATP1A1P05023 1023 aaKnown RBP3.62□□□□□ -1.83
SCAF11-210ENST00000547654 ALOX5P09917 674 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 H2BFMP0C1H6 154 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 MCF2P10911 925 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 PGCP20142 388 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 CHMLP26374 656 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 CASP14P31944 242 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 RPL9P32969 192 aaKnown RBP3.62□□□□□ -1.83
SCAF11-210ENST00000547654 BRCC3P46736 316 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 PGFP49763 221 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 VEGFCP49767 419 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 EMDP50402 254 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 EFNB2P52799 333 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 ATP1B3P54709 279 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 SPAG1Q07617 926 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 RGS1Q08116 209 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 RIGQ13278 110 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 CYBRD1Q53TN4 286 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 ACSM5Q6NUN0 579 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 FAM71F2Q6NXP2 309 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 ZNF790Q6PG37 636 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 ATRAIDQ6UW56 229 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 BTNL3Q6UXE8 466 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 SH2D5Q6ZV89 423 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 H2BFWTQ7Z2G1 175 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 NFE4Q86UQ8 179 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 KATNAL2Q8IYT4 538 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 RAB42Q8N4Z0 105 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 DHRSXQ8N5I4 330 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 MFSD9Q8NBP5 474 aa3.62□□□□□ -1.83
SCAF11-210ENST00000547654 POC1AQ8NBT0 407 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms