RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PLEKHG7Q6ZR37 379 aa11.79□□□□□ -0.52
SCAF11-209ENST00000547018 DCDC5Q6ZRR9 648 aa11.79□□□□□ -0.52
SCAF11-209ENST00000547018 KLBQ86Z14 1044 aa11.79□□□□□ -0.52
SCAF11-209ENST00000547018 OR6Q1Q8NGQ2 317 aa11.79□□□□□ -0.52
SCAF11-209ENST00000547018 FANK1Q8TC84 345 aa11.79□□□□□ -0.52
SCAF11-209ENST00000547018 NT5CQ8TCD5 201 aa11.79□□□□□ -0.52
SCAF11-209ENST00000547018 PHOSPHO1Q8TCT1 267 aa11.79□□□□□ -0.52
SCAF11-209ENST00000547018 GNPDA2Q8TDQ7 276 aa11.79□□□□□ -0.52
SCAF11-209ENST00000547018 TMEM239Q8WW34 195 aa11.79□□□□□ -0.52
SCAF11-209ENST00000547018 DPYSL5Q9BPU6 564 aa11.79□□□□□ -0.52
SCAF11-209ENST00000547018 FN3KQ9H479 309 aa11.79□□□□□ -0.52
SCAF11-209ENST00000547018 CCDC86Q9H6F5 360 aaKnown RBP11.79□□□□□ -0.52
SCAF11-209ENST00000547018 TMEM27Q9HBJ8 222 aa11.79□□□□□ -0.52
SCAF11-209ENST00000547018 HINT3Q9NQE9 182 aaKnown RBP11.79□□□□□ -0.52
SCAF11-209ENST00000547018 CACNA1GO43497 2377 aa11.79□□□□□ -0.52
SCAF11-209ENST00000547018 DVL2O14641 736 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 IMPA2O14732 288 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 DSCR3O14972 297 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 IGKV1D-16P01601 117 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 ITPKBP27987 946 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 CROCCP3Q8IVE0 287 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 CDK20Q8IZL9 346 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 OR4K13Q8NH42 304 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 TNFRSF13CQ96RJ3 184 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 TIGARQ9NQ88 270 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 GMEB1Q9Y692 573 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 DENND4AQ7Z401 1863 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 C2orf72A6NCS6 295 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 BLOC1S5-TXNDC5H3BN57 136 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 HRO43593 1189 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 RFPL3O75679 317 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 INHBBP09529 407 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 NAA10P41227 235 aaPredicted RBP11.78□□□□□ -0.52
SCAF11-209ENST00000547018 RPS25P62851 125 aaKnown RBP11.78□□□□□ -0.52
SCAF11-209ENST00000547018 ALG10BQ5I7T1 473 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 USP43Q70EL4 1123 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 OAFQ86UD1 273 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 LAPTM4BQ86VI4 370 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 DRAXINQ8NBI3 349 aaPredicted RBP11.78□□□□□ -0.52
SCAF11-209ENST00000547018 OR52L1Q8NGH7 329 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 FCGR1BQ92637 280 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 BPIFA2Q96DR5 249 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 COX4I2Q96KJ9 171 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 CD180Q99467 661 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 CDADC1Q9BWV3 514 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 PDE7BQ9NP56 450 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 KLHL1Q9NR64 748 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 FLRT3Q9NZU0 649 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 COMMD3Q9UBI1 195 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 MRPS33Q9Y291 106 aaKnown RBP11.78□□□□□ -0.52
SCAF11-209ENST00000547018 C17orf105B2RV13 164 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 FOXS1O43638 330 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 DPM1O60762 260 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 SOX6P35712 828 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 TSPAN31Q12999 210 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 GKN2Q86XP6 184 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 SAMD14Q8IZD0 417 aaPredicted RBP11.78□□□□□ -0.52
SCAF11-209ENST00000547018 FAM98AQ8NCA5 519 aaKnown RBP11.78□□□□□ -0.52
SCAF11-209ENST00000547018 KBTBD8Q8NFY9 601 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 C16orf52Q8NHV5 167 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 TRUB1Q8WWH5 349 aaKnown RBP11.78□□□□□ -0.52
SCAF11-209ENST00000547018 FOXN4Q96NZ1 517 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 ADOQ96SZ5 270 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 FOLH1BQ9HBA9 442 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 SACM1LQ9NTJ5 587 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 PLCXD1Q9NUJ7 323 aa11.78□□□□□ -0.52
SCAF11-209ENST00000547018 ZNF346Q9UL40 294 aaKnown RBP11.78□□□□□ -0.52
SCAF11-209ENST00000547018 TFECO14948 347 aaPredicted RBP11.77□□□□□ -0.52
SCAF11-209ENST00000547018 TNFSF14O43557 240 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 CSTAP01040 98 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 SMIM10L1P0DMW3 83 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 OMPP47874 163 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 ZNF136P52737 540 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 PSG6Q00889 435 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 ZP2Q05996 745 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 HNRNPA0Q13151 305 aaKnown RBP11.77□□□□□ -0.52
SCAF11-209ENST00000547018 NCF4Q15080 339 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 ARHGAP11BQ3KRB8 267 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 SPANXN2Q5MJ10 180 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 ATP6V1C2Q8NEY4 427 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 OR2T33Q8NG76 320 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 FAM174AQ8TBP5 190 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 TM9SF4Q92544 642 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 FAM131CQ96AQ9 280 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 SMIM10Q96HG1 83 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 BTBD2Q9BX70 525 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 TEX12Q9BXU0 123 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 UBQLN3Q9H347 655 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 SIDT1Q9NXL6 827 aaKnown RBP11.77□□□□□ -0.52
SCAF11-209ENST00000547018 PTGFRNQ9P2B2 879 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 SSR3Q9UNL2 185 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 ADAM18Q9Y3Q7 739 aa11.77□□□□□ -0.52
SCAF11-209ENST00000547018 A0A1B0GWA3 101 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 TRAPPC13A5PLN9 417 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 LOC110117498-PIK3R3F6TDL0 507 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 SOX1O00570 391 aaPredicted RBP11.77□□□□□ -0.53
SCAF11-209ENST00000547018 LALBAP00709 142 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 SDC2P34741 201 aa11.77□□□□□ -0.53
SCAF11-209ENST00000547018 TSFMP43897 325 aaKnown RBP11.77□□□□□ -0.53
SCAF11-209ENST00000547018 RUNX1T1Q06455 604 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms