RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 EXO5Q9H790 373 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 NANOGQ9H9S0 305 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 EXOSC3Q9NQT5 275 aaKnown RBP13.13□□□□□ -0.31
DDX54-203ENST00000546869 SPRR3Q9UBC9 169 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 DKKL1Q9UK85 242 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 ACAD8Q9UKU7 415 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 L3MBTL1Q9Y468 752 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 ESPL1Q14674 2120 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 TRGV8A0A0C4DH27 118 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 AHRRA9YTQ3 701 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 NPIPA2E9PIF3 369 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 E9PLN8 166 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 NPIPA3F8WFD2 350 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 FXYD1O00168 92 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 LRRTM2O43300 516 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 HCRTR2O43614 444 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 WDR1O75083 606 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 DCTN3O75935 186 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 CSTAP01040 98 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 BCHEP06276 602 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 NUDT7P0C024 238 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 UBL4AP11441 157 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 GABRA1P14867 456 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 ETS2P15036 469 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 ZNF17P17021 662 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 HK1P19367 917 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 ADH6P28332 368 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 PGM1P36871 562 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 B3GALT5-AS1P59052 145 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 SRSF1Q07955 248 aaKnown RBP eCLIP13.12□□□□□ -0.31
DDX54-203ENST00000546869 SKP2Q13309 424 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 SF3B4Q15427 424 aaKnown RBP eCLIP13.12□□□□□ -0.31
DDX54-203ENST00000546869 GCNT6Q5T4J0 391 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 GKAP1Q5VSY0 366 aaPredicted RBP13.12□□□□□ -0.31
DDX54-203ENST00000546869 FAM91A1Q658Y4 838 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 REEP3Q6NUK4 255 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 CBLN3Q6UW01 205 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 OLIG3Q7RTU3 272 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 NET1Q7Z628 596 aaPredicted RBP13.12□□□□□ -0.31
DDX54-203ENST00000546869 TREML1Q86YW5 311 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 PEX5LQ8IYB4 626 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 PM20D2Q8IYS1 436 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 C10orf111Q8N326 155 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 OR5W2Q8NH69 310 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 BBS10Q8TAM1 723 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 GPR119Q8TDV5 335 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 PHF10Q8WUB8 498 aaKnown RBP13.12□□□□□ -0.31
DDX54-203ENST00000546869 TMEM19Q96HH6 336 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 VKORC1Q9BQB6 163 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 SPATA9Q9BWV2 254 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 UGT2B28Q9BY64 529 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 EFCAB1Q9HAE3 211 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 CARD8Q9Y2G2 431 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 AP3M1Q9Y2T2 418 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 IFT52Q9Y366 437 aa13.12□□□□□ -0.31
DDX54-203ENST00000546869 C15orf38-AP3S2A0A0A6YYH1 394 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 CENPVL1A0A0U1RR11 272 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 FIGNL2A6NMB9 653 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 PGM3O95394 542 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 TPOP07202 933 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 THBS1P07996 1170 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 LINGO3P0C6S8 592 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 NID1P14543 1247 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 IL7RP16871 459 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 EIF1P41567 113 aaKnown RBP13.11□□□□□ -0.31
DDX54-203ENST00000546869 GZMMP51124 257 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 DLX5P56178 289 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 CDK6Q00534 326 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 C1QL3Q5VWW1 255 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 ENPP6Q6UWR7 440 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 ARSKQ6UWY0 536 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 HACD2Q6Y1H2 254 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 CD163Q86VB7 1156 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 GRAMD2AQ8IUY3 354 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 SLC30A8Q8IWU4 369 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 GTPBP8Q8N3Z3 284 aaPredicted RBP13.11□□□□□ -0.31
DDX54-203ENST00000546869 GATSQ8NAP1 163 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 MAL2Q969L2 176 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 SLC35B4Q969S0 331 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 WDYHV1Q96HA8 205 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 LRRC37BQ96QE4 947 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 DMRTA2Q96SC8 542 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 HOPXQ9BPY8 73 aaPredicted RBP13.11□□□□□ -0.31
DDX54-203ENST00000546869 MED17Q9NVC6 651 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 ERRFI1Q9UJM3 462 aaPredicted RBP13.11□□□□□ -0.31
DDX54-203ENST00000546869 ZNF232Q9UNY5 417 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 MEMO1Q9Y316 297 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 SLC6A5Q9Y345 797 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 SVILO95425 2214 aa13.11□□□□□ -0.31
DDX54-203ENST00000546869 C5orf58C9J3I9 102 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 FAM47E-STBD1D6RA91 191 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 FAAHO00519 579 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 SEMA7AO75326 666 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 PEPDP12955 493 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 SLC6A2P23975 617 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 PSMA4P25789 261 aaKnown RBP13.1□□□□□ -0.31
DDX54-203ENST00000546869 LHX2P50458 406 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 ZNF41P51814 821 aaPredicted RBP13.1□□□□□ -0.31
DDX54-203ENST00000546869 PER3P56645 1201 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 MTPNP58546 118 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms