RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 SGCZQ96LD1 299 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 ANKRD27Q96NW4 1050 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 COL21A1Q96P44 957 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 ADOQ96SZ5 270 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 SECISBP2Q96T21 854 aaKnown RBP5.8□□□□□ -1.48
PRKDC-211ENST00000546304 BTBD2Q9BX70 525 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 OSBPL11Q9BXB4 747 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 HES7Q9BYE0 225 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 TRIM8Q9BZR9 551 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF350Q9GZX5 532 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 SH2D2AQ9NP31 389 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 KLHL1Q9NR64 748 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 EXD2Q9NVH0 621 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 GID8Q9NWU2 228 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 LUZP4Q9P127 313 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 P2RX2Q9UBL9 471 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 TAGLN3Q9UI15 199 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 MRTO4Q9UKD2 239 aaKnown RBP5.8□□□□□ -1.48
PRKDC-211ENST00000546304 ABCG2Q9UNQ0 655 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 PCDHGB3Q9Y5G1 929 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 GMEB1Q9Y692 573 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 CHCHD2Q9Y6H1 151 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-211ENST00000546304 HIVEP3Q5T1R4 2406 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 RELNP78509 3460 aa5.8□□□□□ -1.48
PRKDC-211ENST00000546304 POLEQ07864 2286 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 FLNCQ14315 2725 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 EVPLLA8MZ36 301 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 G3V3Y1 287 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 AIM2O14862 343 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 SORBS2O94875 1100 aaKnown RBP5.79□□□□□ -1.48
PRKDC-211ENST00000546304 SOX30O94993 753 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 IL33O95760 270 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 NPPAP01160 153 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 IGKV1D-16P01601 117 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 P04436 131 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 BCHEP06276 602 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 CHRM4P08173 479 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 DBHP09172 617 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 OR12D1P0DN82 309 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 CYP4B1P13584 511 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 ATP6V1C1P21283 382 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 EVI2BP34910 448 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 PNLIPRP2P54317 469 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 GPR85P60893 370 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 KCNJ2P63252 427 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 RPP38P78345 283 aaKnown RBP5.79□□□□□ -1.48
PRKDC-211ENST00000546304 KLRB1Q12918 225 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 SELPLGQ14242 412 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 KRT72Q14CN4 511 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 RGNQ15493 299 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 INAQ16352 499 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 PLEKHN1Q494U1 663 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-211ENST00000546304 NADK2Q4G0N4 442 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 FLYWCH1Q4VC44 716 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF766Q5HY98 468 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 RABL3Q5HYI8 236 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 BICRALQ6AI39 1079 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 SPINK14Q6IE38 97 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 HEPHL1Q6MZM0 1159 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 HACD2Q6Y1H2 254 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 TRPM8Q7Z2W7 1104 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 GALNTL5Q7Z4T8 443 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 C10orf111Q8N326 155 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 TEX19Q8NA77 164 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 CHDHQ8NE62 594 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-211ENST00000546304 CATSPER1Q8NEC5 780 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 SPPL2AQ8TCT8 520 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 RNF138Q8WVD3 245 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 XAGE5Q8WWM1 108 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 ROPN1LQ96C74 230 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 LRRC58Q96CX6 371 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 TMCO6Q96DC7 493 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF597Q96LX8 424 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 DOHHQ9BU89 302 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 METTL7AQ9H8H3 244 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 GALNT9Q9HCQ5 603 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 A4GALTQ9NPC4 353 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 SACM1LQ9NTJ5 587 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 ARL8BQ9NVJ2 186 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 THUMPD1Q9NXG2 353 aaKnown RBP5.79□□□□□ -1.48
PRKDC-211ENST00000546304 KLRF1Q9NZS2 232 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 FLRT3Q9NZU0 649 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 CNOT11Q9UKZ1 510 aaKnown RBP5.79□□□□□ -1.48
PRKDC-211ENST00000546304 LIPT1Q9Y234 373 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 KLF13Q9Y2Y9 288 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-211ENST00000546304 PCDHGB6Q9Y5F9 930 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 KCNE3Q9Y6H6 103 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 MPDZO75970 2070 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 LRRK2Q5S007 2527 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 PCNX3Q9H6A9 2034 aa5.79□□□□□ -1.48
PRKDC-211ENST00000546304 HELZ2Q9BYK8 2649 aaKnown RBP5.78□□□□□ -1.48
PRKDC-211ENST00000546304 DSPPQ9NZW4 1301 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 NPIPA5A0A0B4J1W7 369 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 CENPVL1A0A0U1RR11 272 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 TMEM247A6NEH6 219 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 LRRC3CA6NJW4 275 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 NPIPA7E9PJI5 369 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 SCO2O43819 266 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 SLC28A2O43868 658 aa5.78□□□□□ -1.48
PRKDC-211ENST00000546304 STX11O75558 287 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms