RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 CRADDP78560 199 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 HMGCS1Q01581 520 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 TNFRSF17Q02223 184 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 PLCXD2Q0VAA5 305 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 P2RY6Q15077 328 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 PPA1Q15181 289 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 HIST2H2ACQ16777 129 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-220ENST00000544550 AP5B1Q2VPB7 878 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 TMEM35AQ53FP2 167 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 TCHHL1Q5QJ38 904 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-220ENST00000544550 RAET1LQ5VY80 246 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 HIST2H2AA3Q6FI13 130 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 KLHL17Q6TDP4 642 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 TMEM108Q6UXF1 575 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 C4orf22Q6V702 233 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 TMEM64Q6YI46 380 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 DGAT2L6Q6ZPD8 337 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 CTAGE6Q86UF2 777 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 GLCCI1Q86VQ1 547 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 P2RY8Q86VZ1 359 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 OR4N5Q8IXE1 308 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 CCDC89Q8N998 374 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 ACOT4Q8N9L9 421 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 OR4K17Q8NGC6 315 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 EEF1AKMT1Q8WVE0 214 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 HGDQ93099 445 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 ADIPOR1Q96A54 375 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 MUCL1Q96DR8 90 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 LINGO1Q96FE5 620 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 NODALQ96S42 347 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 MAPKAP1Q9BPZ7 522 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 CENPKQ9BS16 269 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 TRMOQ9BU70 441 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 FRMD8P1Q9BZ68 369 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-220ENST00000544550 GOLPH3Q9H4A6 298 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 EHD1Q9H4M9 534 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 GSTO2Q9H4Y5 243 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 PTGES2Q9H7Z7 377 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 WDR41Q9HAD4 459 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 GPR35Q9HC97 309 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 FBXO6Q9NRD1 293 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-220ENST00000544550 TAS2R13Q9NYV9 303 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 GPRC5BQ9NZH0 403 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 FBXO9Q9UK97 447 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-220ENST00000544550 FBXL2Q9UKC9 423 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 IKZF3Q9UKT9 509 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 USP22Q9UPT9 525 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 SLC22A14Q9Y267 594 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 GRIP1Q9Y3R0 1128 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 AP4B1Q9Y6B7 739 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 ZANQ9Y493 2812 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 DSCAMO60469 2012 aa3.6□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF407Q9C0G0 2248 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 ARID1AO14497 2285 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 MAGEB16A2A368 324 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 OR6C70A6NIJ9 312 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 B4DSR2 109 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 GOLGA8MH3BSY2 632 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 CLGNO14967 610 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 ZIC3O60481 467 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 RAMP1O60894 148 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 UGT2B11O75310 529 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 GCM2O75603 506 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-220ENST00000544550 AQP8O94778 261 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 WDR47O94967 919 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 SYNGR4O95473 234 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 AIFM1O95831 613 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 BCL10O95999 233 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 CLPSP04118 112 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 TPM3P06753 285 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 ERCC1P07992 297 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-220ENST00000544550 HK1P19367 917 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 GPX3P22352 226 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 SLC6A2P23975 617 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 PTAFRP25105 342 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 MGAT1P26572 445 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 AGTR1P30556 359 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 SERPINB1P30740 379 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 KRT20P35900 424 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 ARFIP1P53367 373 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 SUCLG1P53597 346 aaKnown RBP3.59□□□□□ -1.83
SNHG1-220ENST00000544550 CDH15P55291 814 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 CLDN15P56746 228 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 UBASH3AP57075 661 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 B3GALT5-AS1P59052 145 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 MRPS22P82650 360 aaKnown RBP3.59□□□□□ -1.83
SNHG1-220ENST00000544550 SARNPP82979 210 aaKnown RBP3.59□□□□□ -1.83
SNHG1-220ENST00000544550 CDKL1Q00532 357 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 CDK16Q00536 496 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 SLAMF1Q13291 335 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 ITGADQ13349 1161 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 DHX34Q14147 1143 aaKnown RBP3.59□□□□□ -1.83
SNHG1-220ENST00000544550 EFR3AQ14156 821 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 SLMAPQ14BN4 828 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 STK11Q15831 433 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 CARTPTQ16568 116 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 GLYR1Q49A26 553 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-220ENST00000544550 PAGE2BQ5JRK9 111 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 TIMM23BQ5SRD1 257 aa3.59□□□□□ -1.83
SNHG1-220ENST00000544550 PDSS1Q5T2R2 415 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms