RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 CDC40O60508 579 aaKnown RBP eCLIP12.39□□□□□ -0.43
SP140-213ENST00000543928 EIF4E2O60573 245 aaKnown RBP12.39□□□□□ -0.43
SP140-213ENST00000543928 BCAS1O75363 584 aaPredicted RBP12.39□□□□□ -0.43
SP140-213ENST00000543928 CYP7B1O75881 506 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 PDE9AO76083 593 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 HPNP05981 417 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 FREM3P0C091 2139 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 PABPC4LP0CB38 370 aaKnown RBP12.39□□□□□ -0.43
SP140-213ENST00000543928 UBTFL6P0CB48 400 aaPredicted RBP12.39□□□□□ -0.43
SP140-213ENST00000543928 EDN3P14138 238 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 NID1P14543 1247 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 DPP4P27487 766 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 MSX1P28360 303 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 SRD5A2P31213 254 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 CPOXP36551 454 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 PGM1P36871 562 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 GSK3BP49841 420 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 PCBP3P57721 371 aaKnown RBP12.39□□□□□ -0.43
SP140-213ENST00000543928 EEFSECP57772 596 aaKnown RBP12.39□□□□□ -0.43
SP140-213ENST00000543928 SKP2Q13309 424 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 LARS2Q15031 903 aaKnown RBP12.39□□□□□ -0.43
SP140-213ENST00000543928 LIN52Q52LA3 116 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 KRTCAP3Q53RY4 240 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 ZNF311Q5JNZ3 666 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 INTS11Q5TA45 600 aaKnown RBP12.39□□□□□ -0.43
SP140-213ENST00000543928 CBLN3Q6UW01 205 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 ZNF836Q6ZNA1 936 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 RINLQ6ZS11 566 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 KRT73Q86Y46 540 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 CMIPQ8IY22 773 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 MICU2Q8IYU8 434 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 DEFB107AQ8IZN7 70 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 TMCO5AQ8N6Q1 288 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 RBM15BQ8NDT2 890 aaKnown RBP12.39□□□□□ -0.43
SP140-213ENST00000543928 DTNBP1Q96EV8 351 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 ZNF607Q96SK3 696 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 LAT2Q9GZY6 243 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 SLC6A15Q9H2J7 730 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 ALG2Q9H553 416 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 SEC14L3Q9UDX4 400 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 DKKL1Q9UK85 242 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 ZNF232Q9UNY5 417 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 ZNF443Q9Y2A4 671 aaPredicted RBP12.39□□□□□ -0.43
SP140-213ENST00000543928 IFT52Q9Y366 437 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 LIPGQ9Y5X9 500 aa12.39□□□□□ -0.43
SP140-213ENST00000543928 DNAJC13O75165 2243 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 ELOVL7A1L3X0 281 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 M0QX08 132 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 GCM2O75603 506 aaPredicted RBP12.38□□□□□ -0.43
SP140-213ENST00000543928 SERPINB7O75635 380 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 IGHG3P01860 377 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 THBS1P07996 1170 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 TCEA1P23193 301 aaKnown RBP12.38□□□□□ -0.43
SP140-213ENST00000543928 P2RX1P51575 399 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 CCR4P51679 360 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 DSCR4P56555 118 aaPredicted RBP12.38□□□□□ -0.43
SP140-213ENST00000543928 EEF1A1P68104 462 aaKnown RBP12.38□□□□□ -0.43
SP140-213ENST00000543928 HSF1Q00613 529 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 PLAURQ03405 335 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 VEZF1Q14119 521 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 EIPR1Q53HC9 387 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 WIPI1Q5MNZ9 446 aaPredicted RBP12.38□□□□□ -0.43
SP140-213ENST00000543928 MRPL2Q5T653 305 aaKnown RBP12.38□□□□□ -0.43
SP140-213ENST00000543928 RNF220Q5VTB9 566 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 ARSKQ6UWY0 536 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 PATL1Q86TB9 770 aaKnown RBP12.38□□□□□ -0.43
SP140-213ENST00000543928 YRDCQ86U90 279 aaKnown RBP12.38□□□□□ -0.43
SP140-213ENST00000543928 RNF148Q8N7C7 305 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 FAM71CQ8NEG0 241 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 FAM83FQ8NEG4 500 aaPredicted RBP12.38□□□□□ -0.43
SP140-213ENST00000543928 OR14L1PQ8NHC6 308 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 CNOT9Q92600 299 aaKnown RBP12.38□□□□□ -0.43
SP140-213ENST00000543928 MIB2Q96AX9 1013 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 C1GALT1C1Q96EU7 318 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 CDRT15Q96T59 188 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 KCTD14Q9BQ13 255 aaPredicted RBP12.38□□□□□ -0.43
SP140-213ENST00000543928 KLHDC3Q9BQ90 382 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 SPATA5L1Q9BVQ7 753 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 OR2B2Q9GZK3 357 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 LDAHQ9H6V9 325 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 ACKR4Q9NPB9 350 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 RLIMQ9NVW2 624 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 PACSIN3Q9UKS6 424 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 ICAM5Q9UMF0 924 aa12.38□□□□□ -0.43
SP140-213ENST00000543928 HEATR5AQ86XA9 2040 aa12.37□□□□□ -0.43
SP140-213ENST00000543928 TRGV5A0A0B4J1U4 118 aa12.37□□□□□ -0.43
SP140-213ENST00000543928 CDHR4A6H8M9 788 aa12.37□□□□□ -0.43
SP140-213ENST00000543928 PRORSD1PA6NEY8 169 aa12.37□□□□□ -0.43
SP140-213ENST00000543928 ANKUB1A6NFN9 424 aa12.37□□□□□ -0.43
SP140-213ENST00000543928 ZIC3O60481 467 aa12.37□□□□□ -0.43
SP140-213ENST00000543928 DNAJA2O60884 412 aa12.37□□□□□ -0.43
SP140-213ENST00000543928 NUDT14O95848 222 aa12.37□□□□□ -0.43
SP140-213ENST00000543928 OPN1SWP03999 348 aa12.37□□□□□ -0.43
SP140-213ENST00000543928 HK1P19367 917 aa12.37□□□□□ -0.43
SP140-213ENST00000543928 DMTNQ08495 405 aa12.37□□□□□ -0.43
SP140-213ENST00000543928 GANABQ14697 944 aaKnown RBP12.37□□□□□ -0.43
SP140-213ENST00000543928 IGFBP7Q16270 282 aa12.37□□□□□ -0.43
SP140-213ENST00000543928 C6orf89Q6UWU4 347 aa12.37□□□□□ -0.43
SP140-213ENST00000543928 GFRALQ6UXV0 394 aa12.37□□□□□ -0.43
SP140-213ENST00000543928 CCDC80Q76M96 950 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms