RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ZNF703Q9H7S9 590 aaPredicted RBP5.75□□□□□ -1.49
LTBR-212ENST00000543542 SPAG4Q9NPE6 437 aa5.75□□□□□ -1.49
LTBR-212ENST00000543542 CMTM6Q9NX76 183 aa5.75□□□□□ -1.49
LTBR-212ENST00000543542 KLHL28Q9NXS3 571 aa5.75□□□□□ -1.49
LTBR-212ENST00000543542 ALKBH4Q9NXW9 302 aa5.75□□□□□ -1.49
LTBR-212ENST00000543542 TAS2R10Q9NYW0 307 aa5.75□□□□□ -1.49
LTBR-212ENST00000543542 STOML1Q9UBI4 398 aa5.75□□□□□ -1.49
LTBR-212ENST00000543542 SH3BGRL2Q9UJC5 107 aa5.75□□□□□ -1.49
LTBR-212ENST00000543542 FBXL2Q9UKC9 423 aa5.75□□□□□ -1.49
LTBR-212ENST00000543542 OSGIN2Q9Y236 505 aa5.75□□□□□ -1.49
LTBR-212ENST00000543542 ZNF443Q9Y2A4 671 aaPredicted RBP5.75□□□□□ -1.49
LTBR-212ENST00000543542 SLC6A5Q9Y345 797 aa5.75□□□□□ -1.49
LTBR-212ENST00000543542 NCKAP5O14513 1909 aa5.75□□□□□ -1.49
LTBR-212ENST00000543542 IGSF10Q6WRI0 2623 aa5.75□□□□□ -1.49
LTBR-212ENST00000543542 A0A087WZY1 265 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 TRGV8A0A0C4DH27 118 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 CENPVL1A0A0U1RR11 272 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 CLDN24A6NM45 220 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 NPIPA2E9PIF3 369 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 NPIPB9F8W1W9 429 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 NPIPA3F8WFD2 350 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 H3BML4 177 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 PYCARD-AS1I3L0S3 204 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 M0QX08 132 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 NME4O00746 187 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 PRRG2O14669 202 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 ZNHIT1O43257 154 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 HCN1O60741 890 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 DNAJA2O60884 412 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 UBOX5O94941 541 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 ZIC2O95409 532 aaPredicted RBP5.74□□□□□ -1.49
LTBR-212ENST00000543542 STAMBPO95630 424 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 IFNA14P01570 189 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 OPN1SWP03999 348 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 HPNP05981 417 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 THBS1P07996 1170 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 LINGO3P0C6S8 592 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 PABPC4LP0CB38 370 aaKnown RBP5.74□□□□□ -1.49
LTBR-212ENST00000543542 GP1BBP13224 206 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 ETS2P15036 469 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 TCN1P20061 433 aaPredicted RBP5.74□□□□□ -1.49
LTBR-212ENST00000543542 GNLYP22749 145 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 PCGF2P35227 344 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 PTGS2P35354 604 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 ADH7P40394 386 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 SLC6A8P48029 635 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 SUMO3P55854 103 aaPredicted RBP5.74□□□□□ -1.49
LTBR-212ENST00000543542 EEFSECP57772 596 aaKnown RBP5.74□□□□□ -1.49
LTBR-212ENST00000543542 COPZ1P61923 177 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 MRPL49Q13405 166 aaKnown RBP5.74□□□□□ -1.49
LTBR-212ENST00000543542 MAPK11Q15759 364 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 ADRM1Q16186 407 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 ZSWIM7Q19AV6 140 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 CMPK2Q5EBM0 449 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 SAMD4BQ5PRF9 694 aaKnown RBP5.74□□□□□ -1.49
LTBR-212ENST00000543542 MRPL2Q5T653 305 aaKnown RBP5.74□□□□□ -1.49
LTBR-212ENST00000543542 WLSQ5T9L3 541 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 FNDC7Q5VTL7 733 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 ZNF324BQ6AW86 544 aaPredicted RBP5.74□□□□□ -1.49
LTBR-212ENST00000543542 PPP4R4Q6NUP7 873 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 AAGABQ6PD74 315 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 POMZP3Q6PJE2 187 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 CBLN3Q6UW01 205 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 ENPP6Q6UWR7 440 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 ZNF836Q6ZNA1 936 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 RINLQ6ZS11 566 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 TRILQ7L0X0 811 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 CHMP1BQ7LBR1 199 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 ZNF550Q7Z398 422 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 NET1Q7Z628 596 aaPredicted RBP5.74□□□□□ -1.49
LTBR-212ENST00000543542 PTOV1Q86YD1 416 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 SPPL2CQ8IUH8 684 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 SIAH3Q8IW03 269 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 CMIPQ8IY22 773 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 SLC15A3Q8IY34 581 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 ZNF440Q8IYI8 595 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 PGAM4Q8N0Y7 254 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 CADM2Q8N3J6 435 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 RNF148Q8N7C7 305 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 FADS6Q8N9I5 356 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 SMYD1Q8NB12 490 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 GALNT11Q8NCW6 608 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 ATP6V1C2Q8NEY4 427 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 BHLHE22Q8NFJ8 381 aaPredicted RBP5.74□□□□□ -1.49
LTBR-212ENST00000543542 OR5M1Q8NGP8 315 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 OR5W2Q8NH69 310 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 NEIL3Q8TAT5 605 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 RNF138Q8WVD3 245 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 RASSF5Q8WWW0 418 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 FIG4Q92562 907 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 ABTB1Q969K4 478 aaPredicted RBP5.74□□□□□ -1.49
LTBR-212ENST00000543542 FAM162AQ96A26 154 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 MIB2Q96AX9 1013 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 SARAFQ96BY9 339 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 C1GALT1C1Q96EU7 318 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 ZNF583Q96ND8 569 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 CDRT15Q96T59 188 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 SLX1AQ9BQ83 275 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 PIGQQ9BRB3 760 aa5.74□□□□□ -1.49
LTBR-212ENST00000543542 GPATCH1Q9BRR8 931 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms