RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 PTTG3PQ9NZH4 202 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 ZNF780BQ9Y6R6 833 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 NOTCH4Q99466 2003 aa12.02□□□□□ -0.48
DDX11-223ENST00000542838 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 EDDM13A0A1B0GTR0 161 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 ANTXRLA6NF34 631 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 I3L521 148 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 SDHBP21912 280 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 ARFIP1P53367 373 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 DGCR2P98153 550 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 TRAM1Q15629 374 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 MLF2Q15773 248 aaPredicted RBP12.02□□□□□ -0.49
DDX11-223ENST00000542838 ZNF836Q6ZNA1 936 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 ADGRD2Q7Z7M1 963 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 SPERTQ8NA61 448 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 SLC16A11Q8NCK7 471 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 C7orf57Q8NEG2 295 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 C17orf47Q8NEP4 570 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 BEST4Q8NFU0 473 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 OR2L5Q8NG80 312 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 ADAMTS14Q8WXS8 1223 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 CDS1Q92903 461 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 YIPF5Q969M3 257 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 GIMAP5Q96F15 307 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 CD180Q99467 661 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 HEXA-AS1Q9H8Q6 139 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 UCKL1Q9NWZ5 548 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 TMEM5Q9Y2B1 443 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 TEX51A0A1B0GUA7 166 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 SLC9A3R1O14745 358 aaPredicted RBP12.02□□□□□ -0.49
DDX11-223ENST00000542838 LATO43561 262 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 SCO1O75880 301 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 FGF19O95750 216 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 RAB3BP20337 219 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 SSTR2P30874 369 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 FXYD6P3P58550 94 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 RPTNQ6XPR3 784 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 SLAIN1Q8ND83 568 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 TOR1AIP2Q8NFQ8 470 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 PFN4Q8NHR9 129 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 KISS1RQ969F8 398 aaPredicted RBP12.02□□□□□ -0.49
DDX11-223ENST00000542838 C4orf36Q96KX1 117 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 HS6ST2Q96MM7 605 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 SORCS2Q96PQ0 1159 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 ERVMER34-1Q9H9K5 563 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 SIDT1Q9NXL6 827 aaKnown RBP12.02□□□□□ -0.49
DDX11-223ENST00000542838 WDR45Q9Y484 360 aa12.02□□□□□ -0.49
DDX11-223ENST00000542838 SCN3AQ9NY46 2000 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 SNRNP200O75643 2136 aaKnown RBP12.01□□□□□ -0.49
DDX11-223ENST00000542838 MDC1Q14676 2089 aaKnown RBP12.01□□□□□ -0.49
DDX11-223ENST00000542838 PRR23D1E9PI22 279 aaPredicted RBP12.01□□□□□ -0.49
DDX11-223ENST00000542838 BHLHE40O14503 412 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 H2AFB2P0C5Z0 115 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 PRR23D2P0DMB1 279 aaPredicted RBP12.01□□□□□ -0.49
DDX11-223ENST00000542838 MAKP20794 623 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 TEAD1P28347 426 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 RAB28P51157 221 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 ZNF81P51508 661 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 ELAVL3Q14576 367 aaKnown RBP12.01□□□□□ -0.49
DDX11-223ENST00000542838 ACSM3Q53FZ2 586 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 CCNJQ5T5M9 372 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 FAM111BQ6SJ93 734 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 GPALPP1Q8IXQ4 340 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 SMAP2Q8WU79 429 aaPredicted RBP12.01□□□□□ -0.49
DDX11-223ENST00000542838 COL26A1Q96A83 441 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 MS4A3Q96HJ5 214 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 ZNF681Q96N22 645 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 CLEC4MQ9H2X3 399 aaPredicted RBP12.01□□□□□ -0.49
DDX11-223ENST00000542838 MTHFD2LQ9H903 347 aaPredicted RBP12.01□□□□□ -0.49
DDX11-223ENST00000542838 AUP1Q9Y679 476 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 FAM86C2PA6NEL3 165 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 DUXAA6NLW8 204 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 PEPDP12955 493 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 SNRPBP14678 240 aaKnown RBP12.01□□□□□ -0.49
DDX11-223ENST00000542838 CD53P19397 219 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 ENPP1P22413 925 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 DNASE1P24855 282 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 OR12D2P58182 307 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 ERVK-21P61565 698 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 HSF2Q03933 536 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 SNTA1Q13424 505 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 KRT33BQ14525 404 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 ST3GAL2Q16842 350 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 GSG1Q2KHT4 349 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 LGALSLQ3ZCW2 172 aaPredicted RBP12.01□□□□□ -0.49
DDX11-223ENST00000542838 OR13C5Q8NGS8 318 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 PCNPQ8WW12 178 aaKnown RBP12.01□□□□□ -0.49
DDX11-223ENST00000542838 GIMAP1Q8WWP7 306 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 PTP4A1Q93096 173 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 LRRC3BQ96PB8 259 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 TEAD3Q99594 435 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 BEX1Q9HBH7 125 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 SLC6A20Q9NP91 592 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 INPP5EQ9NRR6 644 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 COPZ2Q9P299 210 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 NUP50Q9UKX7 468 aa12.01□□□□□ -0.49
DDX11-223ENST00000542838 TRPM6Q9BX84 2022 aa12□□□□□ -0.49
DDX11-223ENST00000542838 A0A0B4J203 849 aa12□□□□□ -0.49
DDX11-223ENST00000542838 SLC22A31A6NKX4 558 aa12□□□□□ -0.49
DDX11-223ENST00000542838 HIDE1A8MVS5 230 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms