RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 UGGT2Q9NYU1 1516 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 PLA2R1Q13018 1463 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 MBD5Q9P267 1494 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 SSH2Q76I76 1423 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 PNPLA6Q8IY17 1366 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 TNRQ92752 1358 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 UMODL1Q5DID0 1318 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 ZNF532Q9HCE3 1301 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 IGKV3D-15A0A087WSY6 115 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 A0A087X002 238 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 TRBV5-5A0A0J9YX44 114 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 A0A0U1RQV5 110 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 TMEM120BA0PK00 339 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 XKRY2A2RUG3 117 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 MTMR11A4FU01 709 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 ANTXRLA6NF34 631 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 MSGN1A6NI15 193 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 OR6C70A6NIJ9 312 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 GPR171O14626 319 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 ZNF195O14628 629 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 CHMP2AO43633 222 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 NME2P1O60361 137 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 GMDSO60547 372 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 KHDRBS3O75525 346 aaKnown RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 IDH1O75874 414 aaKnown RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 SULT1C4O75897 302 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 CCNKO75909 580 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 DCTN3O75935 186 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 KRT33AO76009 404 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 OR7A10O76100 309 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 RPP14O95059 124 aaKnown RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 CCNB2O95067 398 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 NXPH2O95156 264 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 AHSA1O95433 338 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 CSF2P04141 144 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 KRT8P05787 483 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 UBTFL1P0CB47 393 aaPredicted RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 SLC2A2P11168 524 aaPredicted RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 CCNB1P14635 433 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 GOT1P17174 413 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 TCP1P17987 556 aaKnown RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 NCF2P19878 526 aaPredicted RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 SRD5A2P31213 254 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 MAGEA4P43358 317 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 SYKP43405 635 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 YAP1P46937 504 aaKnown RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 GBX2P52951 348 aaPredicted RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 PLK1P53350 603 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 PAX9P55771 341 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 EIF3EP60228 445 aaKnown RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 IFITM2Q01629 132 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 SELPLGQ14242 412 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 FLOT2Q14254 428 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 PON2Q15165 354 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 FCN2Q15485 313 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 CEBPEQ15744 281 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 PPP1R3AQ16821 1122 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 HLA-BQ31612 363 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 KLHL12Q53G59 568 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 ZNF542PQ5EBM4 170 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 XKR6Q5GH73 641 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 MARCH8Q5T0T0 291 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 C1orf185Q5T7R7 199 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 BSPRYQ5W0U4 402 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 CES4AQ5XG92 561 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 CLEC6AQ6EIG7 209 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 UGT3A1Q6NUS8 523 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 DEGS2Q6QHC5 323 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 ARSKQ6UWY0 536 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 VITQ6UXI7 678 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 GPRIN3Q6ZVF9 776 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 CPEB2Q7Z5Q1 589 aaKnown RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 PTAR1Q7Z6K3 402 aaPredicted RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 TPRA1Q86W33 373 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 GPBP1Q86WP2 473 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 RALGPS2Q86X27 583 aaPredicted RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 ZFAND4Q86XD8 727 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 NELFCDQ8IXH7 590 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 MREGQ8N565 214 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 RNF148Q8N7C7 305 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 ASCC1Q8N9N2 400 aaKnown RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 OR5T2Q8NGG2 359 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 OR56B1Q8NGI3 324 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 OR4C15Q8NGM1 316 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 OR10G8Q8NGN5 311 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 OR6Q1Q8NGQ2 317 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 AENQ8WTP8 325 aaKnown RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 CCDC12Q8WUD4 166 aaPredicted RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 CHURC1Q8WUH1 139 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 CAPSLQ8WWF8 208 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 TRUB1Q8WWH5 349 aaKnown RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 PIK3R3Q92569 461 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 YIPF5Q969M3 257 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 CPNE4Q96A23 557 aaPredicted RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 CCDC51Q96ER9 411 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 C4orf45Q96LM5 186 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 LINC00479Q96M42 142 aa2.8□□□□□ -1.96
USP28-210ENST00000542033 ZNF184Q99676 751 aaPredicted RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 NKX3-1Q99801 234 aaPredicted RBP2.8□□□□□ -1.96
USP28-210ENST00000542033 CCDC3Q9BQI4 270 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms