RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 STK32CQ86UX6 486 aa7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 SAMD14Q8IZD0 417 aaPredicted RBP7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 PAPD5Q8NDF8 572 aaKnown RBP7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 OR6T1Q8NGN1 323 aa7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 ZNF675Q8TD23 568 aa7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 MED12Q93074 2177 aa7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 DOCK10Q96BY6 2186 aa7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 VSTM2LQ96N03 204 aa7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 RAD21L1Q9H4I0 556 aa7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 IL1RAPQ9NPH3 570 aa7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 NDUFAF4Q9P032 175 aa7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 NTMQ9P121 344 aa7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 ZNF223Q9UK11 482 aaPredicted RBP7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 RPS6KA6Q9UK32 745 aa7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 PTRH2Q9Y3E5 179 aaKnown RBP7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 WDR45Q9Y484 360 aa7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 OR10H1Q9Y4A9 318 aa7.13□□□□□ -1.27
AC005840.3-201ENST00000541888 MED13Q9UHV7 2174 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 ZZEF1O43149 2961 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 A0A087WV62 115 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 CPSF4LA6NMK7 179 aaKnown RBP7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 PLD2O14939 933 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 PRAMEF2O60811 474 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 KLF7O75840 302 aaPredicted RBP7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 CYP7B1O75881 506 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 TNFSF15O95150 251 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 UMODP07911 640 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 GNAO1P09471 354 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 UMPSP11172 480 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 CYP4B1P13584 511 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 MYF6P23409 242 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 POLR2IP36954 125 aaKnown RBP7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 EIF2B2P49770 351 aaKnown RBP7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 NR0B1P51843 470 aaKnown RBP7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 EMP2P54851 167 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 POU6F2P78424 691 aaPredicted RBP7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 SPIBQ01892 262 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 RBBP4Q09028 425 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 FUT7Q11130 342 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 PIN1Q13526 163 aaPredicted RBP7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 NPTX1Q15818 432 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 ZNF311Q5JNZ3 666 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 PDZK1Q5T2W1 519 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 ATAD3BQ5T9A4 648 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 INTS11Q5TA45 600 aaKnown RBP7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 CDCP2Q5VXM1 449 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 ZNF836Q6ZNA1 936 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 ZBTB49Q6ZSB9 765 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 CDRT4Q8N9R6 151 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 OR4C3Q8NH37 302 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 APOBEC4Q8WW27 367 aaKnown RBP7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 DNAJA3Q96EY1 480 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 WDR89Q96FK6 387 aaPredicted RBP7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 CENPNQ96H22 339 aaPredicted RBP7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 SPATA9Q9BWV2 254 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 RTN4RQ9BZR6 473 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 PIGUQ9H490 435 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 GSX1Q9H4S2 264 aaPredicted RBP7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 FBXO8Q9NRD0 319 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 OLAHQ9NV23 265 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 AP3M1Q9Y2T2 418 aa7.12□□□□□ -1.27
AC005840.3-201ENST00000541888 SYNDIG1LA6NDD5 238 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 H3BMQ9 156 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 WWP2O00308 870 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 DLGAP1O14490 977 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 PCDH17O14917 1159 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 UGT2B17O75795 530 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 SNAP29O95721 258 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 IGKV3-11P04433 115 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 ALPPP05187 535 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 KLK3P07288 261 aaPredicted RBP7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 IL7RP16871 459 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 TCN2P20062 427 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 SPINK2P20155 84 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 OTX2P32243 289 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 TRHRP34981 398 aaPredicted RBP7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 ADMP35318 185 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 DCTP40126 519 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 MAP3K8P41279 467 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 MAGEA2P43356 314 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 KCNJ5P48544 419 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 TRA2AQ13595 282 aaKnown RBP eCLIP7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 SERTAD2Q14140 314 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 ELAVL1Q15717 326 aaKnown RBP7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 ARHGAP11BQ3KRB8 267 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 FLYWCH1Q4VC44 716 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 IFI44LQ53G44 452 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 OR2T5Q6IEZ7 315 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 HEPHL1Q6MZM0 1159 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 PAPD4Q6PIY7 484 aaKnown RBP7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 MED25Q71SY5 747 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 OFCC1Q8IZS5 231 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 NLGN4XQ8N0W4 816 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 BCORP1Q8N888 145 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 GOLM1Q8NBJ4 401 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 APCDD1LQ8NCL9 501 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 OR9Q2Q8NGE9 314 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 OR2T29Q8NH02 315 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 OR52P1PQ8NH57 321 aa7.11□□□□□ -1.27
AC005840.3-201ENST00000541888 ADAMTS18Q8TE60 1221 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms