RNA–Protein interactions for RNA: ENST00000541371.5

PRPF19-206, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 3

Gene PRPF19, Length 943 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-206ENST00000541371 IGFBPL1Q8WX77 278 aa11.8□□□□□ -0.52
PRPF19-206ENST00000541371 AKAP1Q92667 903 aaKnown RBP eCLIP11.8□□□□□ -0.52
PRPF19-206ENST00000541371 MTERF3Q96E29 417 aa11.8□□□□□ -0.52
PRPF19-206ENST00000541371 TMEM204Q9BSN7 226 aa11.8□□□□□ -0.52
PRPF19-206ENST00000541371 HDHD5Q9BXW7 423 aa11.8□□□□□ -0.52
PRPF19-206ENST00000541371 ZCCHC3Q9NUD5 404 aaKnown RBP11.8□□□□□ -0.52
PRPF19-206ENST00000541371 LAMP3Q9UQV4 416 aa11.8□□□□□ -0.52
PRPF19-206ENST00000541371 TMED5Q9Y3A6 229 aa11.8□□□□□ -0.52
PRPF19-206ENST00000541371 HEATR5AQ86XA9 2040 aa11.8□□□□□ -0.52
PRPF19-206ENST00000541371 RAI1Q7Z5J4 1906 aaPredicted RBP11.8□□□□□ -0.52
PRPF19-206ENST00000541371 GJE1A6NN92 205 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 H3BNH8 94 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 KIF2AO00139 706 aaPredicted RBP11.79□□□□□ -0.52
PRPF19-206ENST00000541371 LSM1O15116 133 aaKnown RBP11.79□□□□□ -0.52
PRPF19-206ENST00000541371 TRIM13O60858 407 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 HMGN2P05204 90 aaKnown RBP11.79□□□□□ -0.52
PRPF19-206ENST00000541371 LINGO3P0C6S8 592 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 KRT4P19013 534 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 IL32P24001 234 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 ELK4P28324 431 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 HPCAL1P37235 193 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 RPS4XP62701 263 aaKnown RBP11.79□□□□□ -0.52
PRPF19-206ENST00000541371 FOXF1Q12946 379 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 RNPS1Q15287 305 aaKnown RBP11.79□□□□□ -0.52
PRPF19-206ENST00000541371 CD226Q15762 336 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 ZNF239Q16600 458 aaKnown RBP11.79□□□□□ -0.52
PRPF19-206ENST00000541371 LRIG3Q6UXM1 1119 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 RNF165Q6ZSG1 346 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 MTERF4Q7Z6M4 381 aaKnown RBP11.79□□□□□ -0.52
PRPF19-206ENST00000541371 DDIASQ8IXT1 998 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 GSPT2Q8IYD1 628 aaKnown RBP11.79□□□□□ -0.52
PRPF19-206ENST00000541371 ZNF527Q8NB42 609 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 KIF18AQ8NI77 898 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 RNF128Q8TEB7 428 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 ABHD3Q8WU67 409 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 UBLCP1Q8WVY7 318 aaPredicted RBP11.79□□□□□ -0.52
PRPF19-206ENST00000541371 CDS1Q92903 461 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 CPNE4Q96A23 557 aaPredicted RBP11.79□□□□□ -0.52
PRPF19-206ENST00000541371 S100PBPQ96BU1 408 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 FAM120BQ96EK7 910 aaKnown RBP11.79□□□□□ -0.52
PRPF19-206ENST00000541371 STACQ99469 402 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 KLHDC3Q9BQ90 382 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 TRMOQ9BU70 441 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 GATA5Q9BWX5 397 aaPredicted RBP11.79□□□□□ -0.52
PRPF19-206ENST00000541371 HOXD1Q9GZZ0 328 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 PIGUQ9H490 435 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 TUBB1Q9H4B7 451 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 PPCSQ9HAB8 311 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 NGBQ9NPG2 151 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 DUSP22Q9NRW4 184 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 DNAJC15Q9Y5T4 150 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 SNX8Q9Y5X2 465 aa11.79□□□□□ -0.52
PRPF19-206ENST00000541371 TMEM114B3SHH9 223 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 GTPBP1O00178 669 aaKnown RBP11.78□□□□□ -0.52
PRPF19-206ENST00000541371 ZNF195O14628 629 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 CLOCKO15516 846 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 SHBGP04278 402 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 BCKDHAP12694 445 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 ADH6P28332 368 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 SHC1P29353 583 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 RPL3P39023 403 aaKnown RBP11.78□□□□□ -0.52
PRPF19-206ENST00000541371 ZNF117Q03924 483 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 ZNF844Q08AG5 666 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 CAPRIN1Q14444 709 aaKnown RBP11.78□□□□□ -0.52
PRPF19-206ENST00000541371 LASP1Q14847 261 aaKnown RBP11.78□□□□□ -0.52
PRPF19-206ENST00000541371 MLC1Q15049 377 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 TMEM176BQ3YBM2 270 aaPredicted RBP11.78□□□□□ -0.52
PRPF19-206ENST00000541371 EXOSC6Q5RKV6 272 aaKnown RBP11.78□□□□□ -0.52
PRPF19-206ENST00000541371 KANK2Q63ZY3 851 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 TFAP2EQ6VUC0 442 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 TUSC5Q8IXB3 177 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 C4orf33Q8N1A6 199 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 ATP6V1C2Q8NEY4 427 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 FBXO27Q8NI29 283 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 RAB3IL1Q8TBN0 382 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 ADAMTS15Q8TE58 950 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 SIRT3Q9NTG7 399 aaPredicted RBP11.78□□□□□ -0.52
PRPF19-206ENST00000541371 GIN1Q9NXP7 522 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 KLHL13Q9P2N7 655 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 ATP6V1HQ9UI12 483 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 FAF1Q9UNN5 650 aaPredicted RBP11.78□□□□□ -0.52
PRPF19-206ENST00000541371 CARD8Q9Y2G2 431 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 RNF115Q9Y4L5 304 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 GPC6Q9Y625 555 aaPredicted RBP11.78□□□□□ -0.52
PRPF19-206ENST00000541371 ROS1P08922 2347 aa11.78□□□□□ -0.52
PRPF19-206ENST00000541371 HIVEP2P31629 2446 aa11.77□□□□□ -0.52
PRPF19-206ENST00000541371 USF3Q68DE3 2245 aa11.77□□□□□ -0.53
PRPF19-206ENST00000541371 NPIPA5A0A0B4J1W7 369 aa11.77□□□□□ -0.53
PRPF19-206ENST00000541371 NPIPA7E9PJI5 369 aa11.77□□□□□ -0.53
PRPF19-206ENST00000541371 SCAMP2O15127 329 aaKnown RBP11.77□□□□□ -0.53
PRPF19-206ENST00000541371 GCM2O75603 506 aaPredicted RBP11.77□□□□□ -0.53
PRPF19-206ENST00000541371 PRKD3O94806 890 aa11.77□□□□□ -0.53
PRPF19-206ENST00000541371 SOX30O94993 753 aa11.77□□□□□ -0.53
PRPF19-206ENST00000541371 CD3EP07766 207 aa11.77□□□□□ -0.53
PRPF19-206ENST00000541371 NPIPA8P0DM63 369 aa11.77□□□□□ -0.53
PRPF19-206ENST00000541371 MAPK1P28482 360 aa11.77□□□□□ -0.53
PRPF19-206ENST00000541371 CCT3P49368 545 aaKnown RBP11.77□□□□□ -0.53
PRPF19-206ENST00000541371 RNF144AP50876 292 aaPredicted RBP11.77□□□□□ -0.53
PRPF19-206ENST00000541371 P2RX1P51575 399 aa11.77□□□□□ -0.53
PRPF19-206ENST00000541371 SUMO3P55854 103 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms