RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ANKFN1Q8N957 763 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 C9orf106Q8NAJ2 232 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 ACBD4Q8NC06 268 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 POC1BQ8TC44 478 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 ZG16BQ96DA0 208 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 AURKBQ96GD4 344 aaPredicted RBP15.25■□□□□ 0.03
CD9-209ENST00000540891 ITCHQ96J02 903 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 UCN2Q96RP3 112 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 PAIP1Q9H074 479 aaKnown RBP15.25■□□□□ 0.03
CD9-209ENST00000540891 RMND5AQ9H871 391 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 CALHM2Q9HA72 323 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 CHST11Q9NPF2 352 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 POLE3Q9NRF9 147 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 CCDC167Q9P0B6 97 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 CLCF1Q9UBD9 225 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 CARD8Q9Y2G2 431 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 WDR45Q9Y484 360 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 CACNA1CQ13936 2221 aa15.25■□□□□ 0.03
CD9-209ENST00000540891 A0A087WZY1 265 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 C7orf72A4D263 438 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 SERINC4A6NH21 518 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 FAM47E-STBD1D6RA91 191 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 H3BML4 177 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 CHRM4P08173 479 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 LINGO3P0C6S8 592 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 ZNF17P17021 662 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 POU3F2P20265 443 aaPredicted RBP15.24■□□□□ 0.03
CD9-209ENST00000540891 CAPN3P20807 821 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 P2RX1P51575 399 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 ZNF136P52737 540 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 CLDN20P56880 219 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 CHRNEQ04844 493 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 SQLEQ14534 574 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 SF3B4Q15427 424 aaKnown RBP eCLIP15.24■□□□□ 0.03
CD9-209ENST00000540891 SYPL1Q16563 259 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 CGB2Q6NT52 195 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 UBQLNLQ8IYU4 475 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 GTPBP8Q8N3Z3 284 aaPredicted RBP15.24■□□□□ 0.03
CD9-209ENST00000540891 ARFGAP2Q8N6H7 521 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 RELL2Q8NC24 303 aaPredicted RBP15.24■□□□□ 0.03
CD9-209ENST00000540891 ZBTB8AQ96BR9 441 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 TPT1P8Q9HAU6 139 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 MED4Q9NPJ6 270 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 NPDC1Q9NQX5 325 aaPredicted RBP15.24■□□□□ 0.03
CD9-209ENST00000540891 L3MBTL1Q9Y468 752 aa15.24■□□□□ 0.03
CD9-209ENST00000540891 HSPB2A8KAH6 182 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 H3BNH8 94 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 LINC01387J3KSC0 135 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 NR5A2O00482 541 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 BCAS1O75363 584 aaPredicted RBP15.23■□□□□ 0.03
CD9-209ENST00000540891 H6PDO95479 791 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 ANP32DO95626 131 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 KRT75O95678 551 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 IRX1P78414 480 aaPredicted RBP15.23■□□□□ 0.03
CD9-209ENST00000540891 TXNL4AP83876 142 aaKnown RBP15.23■□□□□ 0.03
CD9-209ENST00000540891 GUCY1A3Q02108 690 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 PLAURQ03405 335 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 TOMM34Q15785 309 aaPredicted RBP15.23■□□□□ 0.03
CD9-209ENST00000540891 HSPB2Q16082 182 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 GPAT3Q53EU6 434 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 PAGE3Q5JUK9 113 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 C6orf10Q5SRN2 563 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 HMGN2P46Q86SG4 172 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 GGNQ86UU5 652 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 MSRB3Q8IXL7 192 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 ZNF619Q8N2I2 560 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 SPDL1Q96EA4 605 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 ARSGQ96EG1 525 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 RNF145Q96MT1 663 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 TRNT1Q96Q11 434 aaKnown RBP15.23■□□□□ 0.03
CD9-209ENST00000540891 SIKE1Q9BRV8 207 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 QRSL1Q9H0R6 528 aaKnown RBP15.23■□□□□ 0.03
CD9-209ENST00000540891 SLC38A1Q9H2H9 487 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 RUBCNLQ9H714 662 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 TMEM45AQ9NWC5 275 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 SLC25A37Q9NYZ2 338 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 SLAMF8Q9P0V8 285 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 PCDHB14Q9Y5E9 798 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 AP4B1Q9Y6B7 739 aa15.23■□□□□ 0.03
CD9-209ENST00000540891 A0A0G2JND7 137 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 GTPBP1O00178 669 aaKnown RBP15.22■□□□□ 0.03
CD9-209ENST00000540891 ZNF264O43296 627 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 SEC14L5O43304 696 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 ATP8B1O43520 1251 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 EIF4E2O60573 245 aaKnown RBP15.22■□□□□ 0.03
CD9-209ENST00000540891 DNAJA2O60884 412 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 TGM6O95932 706 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 IL2RAP01589 272 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 UBL4AP11441 157 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 ETFAP13804 333 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 IGFBP2P18065 325 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 IL11P20809 199 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 PGM1P36871 562 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 ZNF41P51814 821 aaPredicted RBP15.22■□□□□ 0.03
CD9-209ENST00000540891 SUMO3P55854 103 aaPredicted RBP15.22■□□□□ 0.03
CD9-209ENST00000540891 FOXF1Q12946 379 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 SKP2Q13309 424 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 FGFBP1Q14512 234 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 AGKQ53H12 422 aa15.22■□□□□ 0.03
CD9-209ENST00000540891 HSP90B2PQ58FF3 399 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms