RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 LRRC58Q96CX6 371 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 ZG16BQ96DA0 208 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 LRRC37BQ96QE4 947 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 TREX2Q9BQ50 279 aaPredicted RBP6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 KLHDC3Q9BQ90 382 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 DSN1Q9H410 356 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 TMEM38AQ9H6F2 299 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 KAT8Q9H7Z6 458 aaKnown RBP6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 NANOGQ9H9S0 305 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 HHATLQ9HCP6 504 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 BCL2L10Q9HD36 194 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 CALML5Q9NZT1 146 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 MED11Q9P086 117 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 SPRR3Q9UBC9 169 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 SUCOQ9UBS9 1254 aaKnown RBP6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 DKKL1Q9UK85 242 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 ICAM5Q9UMF0 924 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 ZNF835Q9Y2P0 537 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 LRRK2Q5S007 2527 aa6.34□□□□□ -1.39
LPCAT3-209ENST00000540060 NCOA6Q14686 2063 aaPredicted RBP6.34□□□□□ -1.4
LPCAT3-209ENST00000540060 POLEQ07864 2286 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 TRGV5A0A0B4J1U4 118 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 A0A0G2JPF8 293 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 OR14I1A6ND48 311 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 TMEM247A6NEH6 219 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 AGAP5A6NIR3 686 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 CLDN24A6NM45 220 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 HNRNPCL2B2RXH8 293 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 HNRNPCL3B7ZW38 293 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 H3BNH8 94 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 NDUFAB1O14561 156 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 ZNF264O43296 627 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 HCRTR2O43614 444 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 GMFGO60234 142 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 HNRNPCL1O60812 293 aaKnown RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 BCAS1O75363 584 aaPredicted RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 TRAPPC6AO75865 159 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 WISP1O95388 367 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 STSP08842 583 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 HNRNPCL4P0DMR1 293 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 ABOP16442 354 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 SLC6A2P23975 617 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 DPP4P27487 766 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 MSX1P28360 303 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 PGM1P36871 562 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 NUDT2P50583 147 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 GZMMP51124 257 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 P2RX1P51575 399 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 SUMO3P55854 103 aaPredicted RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 GFRA1P56159 465 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 DSCR4P56555 118 aaPredicted RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 B3GALT5-AS1P59052 145 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 RBPJQ06330 500 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 CRYZQ08257 329 aaKnown RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 SCARB2Q14108 478 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 ELOAQ14241 798 aaKnown RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 GNA13Q14344 377 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 SLC10A1Q14973 349 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 TOMM20Q15388 145 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 CYP51A1Q16850 503 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 ZNF630Q2M218 657 aaPredicted RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 NDUFAF6Q330K2 333 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 EIPR1Q53HC9 387 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 NHSL2Q5HYW2 709 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 WIPI1Q5MNZ9 446 aaPredicted RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 DCST1Q5T197 706 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 CBLN3Q6UW01 205 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 HACD2Q6Y1H2 254 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 HMGN2P46Q86SG4 172 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 SERPINA11Q86U17 422 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 YRDCQ86U90 279 aaKnown RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 IFNEQ86WN2 208 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 CALHM3Q86XJ0 350 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 ZZZ3Q8IYH5 903 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 FITM2Q8N6M3 262 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 METTL25Q8N6Q8 603 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 CCDC197Q8NCU1 140 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 OR14L1PQ8NHC6 308 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 NFKBIDQ8NI38 313 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 BBS10Q8TAM1 723 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 PHOSPHO1Q8TCT1 267 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 BCAS4Q8TDM0 211 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 WDR60Q8WVS4 1066 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 CMTM5Q96DZ9 223 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 C1GALT1C1Q96EU7 318 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 DTNBP1Q96EV8 351 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 SH3YL1Q96HL8 342 aaPredicted RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 GPATCH1Q9BRR8 931 aaKnown RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 THUMPD3Q9BV44 507 aaKnown RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 LDAHQ9H6V9 325 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 PTGES2Q9H7Z7 377 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 MTHFD2LQ9H903 347 aaPredicted RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 GID8Q9NWU2 228 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 DNAJB12Q9NXW2 375 aaKnown RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 TAS2R10Q9NYW0 307 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 TNFRSF10DQ9UBN6 386 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 SLC35A3Q9Y2D2 325 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 CARD8Q9Y2G2 431 aa6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 MRPS18CQ9Y3D5 142 aaKnown RBP6.33□□□□□ -1.4
LPCAT3-209ENST00000540060 ESPL1Q14674 2120 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms