RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 GALNT18Q6P9A2 607 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 FCRLAQ7L513 359 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 P2RY8Q86VZ1 359 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 FBXL14Q8N1E6 418 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 MUC15Q8N387 334 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 MMGT1Q8N4V1 131 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 MRRFQ96E11 262 aaKnown RBP10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 APIPQ96GX9 242 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 SRXN1Q9BYN0 137 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 PLA2G12AQ9BZM1 189 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 CHODLQ9H9P2 273 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 TAS2R7Q9NYW3 318 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 GRHL1Q9NZI5 618 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 NPAP1Q9NZP6 1156 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 GRID1Q9ULK0 1009 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 MGAT4BQ9UQ53 548 aa10.28□□□□□ -0.76
CLSTN3-209ENST00000539982 FAM187AA6NFU0 413 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 SPRY1O43609 319 aaPredicted RBP10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 EFNA2O43921 213 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 PGM3O95394 542 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 OXSR1O95747 527 aaPredicted RBP10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 COL6A2P12110 1019 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 SHC1P29353 583 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 TIA1P31483 386 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 SFTPDP35247 375 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 HSD17B3P37058 310 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 OR3A2P47893 321 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 FABP6P51161 128 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 EFNA4P52798 201 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 C2orf80Q0P641 193 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 GLE1Q53GS7 698 aaKnown RBP10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 TCHHL1Q5QJ38 904 aaPredicted RBP10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 UBAP2Q5T6F2 1119 aaKnown RBP10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 TMEM108Q6UXF1 575 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 PIAS4Q8N2W9 510 aaPredicted RBP10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 SLC43A2Q8N370 569 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 GATSQ8NAP1 163 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 NOA1Q8NC60 698 aaKnown RBP10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 OR2W6PQ8NHA6 318 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 GPR151Q8TDV0 419 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 PIK3R3Q92569 461 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 C1QTNF3Q9BXJ4 246 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 ACPTQ9BZG2 426 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 GLIPR2Q9H4G4 154 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 SIRT5Q9NXA8 310 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 PRSS50Q9UI38 385 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 POU2F3Q9UKI9 436 aa10.27□□□□□ -0.77
CLSTN3-209ENST00000539982 PLCE1Q9P212 2302 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 GJE1A6NN92 205 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 VWC2LB2RUY7 222 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 ANXA4P09525 319 aaPredicted RBP10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 IFI6P09912 130 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 LINGO3P0C6S8 592 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 BMP4P12644 408 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 GGT1P19440 569 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 PTAFRP25105 342 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 ELK4P28324 431 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 MAP3K8P41279 467 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 PLTPP55058 493 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 GUCY2DQ02846 1103 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 CLCQ05315 142 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 RASA2Q15283 850 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 UAP1Q16222 522 aaPredicted RBP10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 SLC22A25Q6T423 547 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 MISPQ8IVT2 679 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 RFLNBQ8N5W9 214 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 B4GALNT2Q8NHY0 566 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 FAM110BQ8TC76 370 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 METTL6Q8TCB7 284 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 HOXB13Q92826 284 aaPredicted RBP10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 MSI2Q96DH6 328 aaKnown RBP10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 SH3YL1Q96HL8 342 aaPredicted RBP10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 AMDHD1Q96NU7 426 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 KLHDC3Q9BQ90 382 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 MRPL57Q9BQC6 102 aaKnown RBP10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 EBPLQ9BY08 206 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 BCO1Q9HAY6 547 aa10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 ING1Q9UK53 422 aaPredicted RBP10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 V9GYY5 206 aaPredicted RBP10.26□□□□□ -0.77
CLSTN3-209ENST00000539982 OR5H1A6NKK0 313 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 ZNF195O14628 629 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 RGS14O43566 566 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 TCF21O43680 179 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 NKX2-2O95096 273 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 DHRS4L1P0CG22 281 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 PRPS2P11908 318 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 HPGDP15428 266 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 ENPP1P22413 925 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 IGHV1-2P23083 117 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 CD40P25942 277 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 CFPP27918 469 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 NTSP30990 170 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 LCN1P31025 176 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 CAV1Q03135 178 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 CHRNB3Q05901 458 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 BTKQ06187 659 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 GGTLC2Q14390 218 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 TSNAXIP1Q2TAA8 658 aa10.25□□□□□ -0.77
CLSTN3-209ENST00000539982 TMEM176BQ3YBM2 270 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms