RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 CREB3L2Q70SY1 520 aa11.7□□□□□ -0.54
SFSWAP-208ENST00000539506 COMMD7Q86VX2 200 aa11.7□□□□□ -0.54
SFSWAP-208ENST00000539506 IL17RCQ8NAC3 791 aa11.7□□□□□ -0.54
SFSWAP-208ENST00000539506 OR2L5Q8NG80 312 aa11.7□□□□□ -0.54
SFSWAP-208ENST00000539506 HSD17B8Q92506 261 aa11.7□□□□□ -0.54
SFSWAP-208ENST00000539506 ELP4Q96EB1 424 aa11.7□□□□□ -0.54
SFSWAP-208ENST00000539506 SLC17A4Q9Y2C5 497 aa11.7□□□□□ -0.54
SFSWAP-208ENST00000539506 U3KQ87 197 aa11.7□□□□□ -0.54
SFSWAP-208ENST00000539506 RFPL3O75679 317 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 PTHLHP12272 177 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 HCCSP53701 268 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 RPS7P62081 194 aaKnown RBP11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 BNC1Q01954 994 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 SLC25A35Q3KQZ1 300 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 C6orf132Q5T0Z8 1188 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 CPOQ8IVL8 374 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 FAIM2Q9BWQ8 316 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 MS4A7Q9GZW8 240 aaPredicted RBP11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 C12orf4Q9NQ89 552 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 SPATA2Q9UM82 520 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 ATG2AQ2TAZ0 1938 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 GON4LQ3T8J9 2241 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 CENPVL1A0A0U1RR11 272 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 A0A1W2PQU0 124 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 GYPBP06028 91 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 ACP2P11117 423 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 GABRA5P31644 462 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 PTGS2P35354 604 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 KRT33BQ14525 404 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 ZNF311Q5JNZ3 666 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 FAM111BQ6SJ93 734 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 SIRT6Q8N6T7 355 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 NUP43Q8NFH3 380 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 OR4D9Q8NGE8 314 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 OR4Q3Q8NH05 313 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 DIO2Q92813 273 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 KXD1Q9BQD3 176 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 ARHGAP9Q9BRR9 750 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 C1QTNF2Q9BXJ5 285 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 RBCK1Q9BYM8 510 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 OR51V1Q9H2C8 321 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 NIPAL2Q9H841 368 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 FGF22Q9HCT0 170 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 SATB2Q9UPW6 733 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 A0A0G2JPF8 293 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 HNRNPCL2B2RXH8 293 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 HNRNPCL3B7ZW38 293 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 SSNA1O43805 119 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 RGS11O94810 467 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 HNRNPCL4P0DMR1 293 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 PDX1P52945 283 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 ZNF155Q12901 538 aaPredicted RBP11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 ADAM15Q13444 863 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 GPM6BQ13491 265 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 SF3A2Q15428 464 aaKnown RBP11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 SLC27A4Q6P1M0 643 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 PLBD1Q6P4A8 553 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 PLEKHM3Q6ZWE6 761 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 VN1R4Q7Z5H5 301 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 GALNT11Q8NCW6 608 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 DUSP18Q8NEJ0 188 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 SLC35A4Q96G79 324 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 TIMM29Q9BSF4 260 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 GTPBP2Q9BX10 602 aaKnown RBP11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 PINK1Q9BXM7 581 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 ENKD1Q9H0I2 346 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 TRPV4Q9HBA0 871 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 ZFP64Q9NPA5 681 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 PHPT1Q9NRX4 125 aaPredicted RBP11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 OR6C2Q9NZP2 312 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 ING4Q9UNL4 249 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 LIPT1Q9Y234 373 aa11.69□□□□□ -0.54
SFSWAP-208ENST00000539506 TEX13CA0A0J9YWL9 993 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 PRODHO43272 600 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 HCN1O60741 890 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 MPC2O95563 127 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 ASGR2P07307 311 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 OMPP47874 163 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 TPBGQ13641 420 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 SUZ12Q15022 739 aaKnown RBP11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 ZNF425Q6IV72 752 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 BHLHB9Q6PI77 547 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 ZNF767PQ75MW2 155 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 MRGPREQ86SM8 312 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 ZNF485Q8NCK3 441 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 SLC16A11Q8NCK7 471 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 TTLQ8NG68 377 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 OR10H4Q8NGA5 316 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 OR4E2Q8NGC2 313 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 COL26A1Q96A83 441 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 C10orf90Q96M02 699 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 HYLS1Q96M11 299 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 ARHGDIGQ99819 225 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 SLCO1C1Q9NYB5 712 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 TBC1D29Q9UFV1 150 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 CA5BQ9Y2D0 317 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 GPR89AB7ZAQ6 455 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 SLC43A1O75387 559 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 GPR89BP0CG08 455 aa11.68□□□□□ -0.54
SFSWAP-208ENST00000539506 CLUP10909 449 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms