RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ZNF527Q8NB42 609 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ADGRG7Q96K78 797 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 NUF2Q9BZD4 464 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 HOXD1Q9GZZ0 328 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 NDRG3Q9UGV2 375 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 CLEC4AQ9UMR7 237 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 CARD8Q9Y2G2 431 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 TESMINQ9Y4I5 508 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 CASKO14936 926 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 CXCL13O43927 109 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 NUDT14O95848 222 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 LINGO3P0C6S8 592 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 POU2F1P14859 743 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ME2P23368 584 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 KCNJ5P48544 419 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 CASP9P55211 416 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 RAC1P63000 192 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 FOXF1Q12946 379 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 STX3Q13277 289 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 GUSBP1Q15486 140 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 MTERF4Q7Z6M4 381 aaKnown RBP17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ANKRD42Q8N9B4 389 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ZNF610Q8N9Z0 462 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 OR4A15Q8NGL6 344 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 OR2V1Q8NHB1 315 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 WFIKKN1Q96NZ8 548 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 SLC39A3Q9BRY0 314 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 DPY30Q9C005 99 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 CXXC4Q9H2H0 198 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 SERHL2Q9H4I8 314 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 PLEKHF2Q9H8W4 249 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 PNPOQ9NVS9 261 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 KLHL28Q9NXS3 571 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 EDARQ9UNE0 448 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 PROCRQ9UNN8 238 aa17.1■□□□□ 0.33
TNFRSF1A-212ENST00000539372 NUP214P35658 2090 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 UQCRHLA0A096LP55 91 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 A0A0J9YW62 118 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 RNF103-CHMP3A0A140T963 221 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 A0A1W2PPR1 153 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 H3BNH8 94 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 GTPBP1O00178 669 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ADAMDEC1O15204 470 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 PLGP00747 810 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 MATN1P21941 496 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 SHC1P29353 583 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 CCKARP32238 428 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 SFTPDP35247 375 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 UGT2B10P36537 528 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ATP12AP54707 1039 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 FGFBP1Q14512 234 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 EXOC3L2Q2M3D2 409 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 HBMQ6B0K9 141 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 BHLHB9Q6PI77 547 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 FAM214BQ7L5A3 538 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 C6orf120Q7Z4R8 191 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ANKRD46Q86W74 232 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 LILRA2Q8N149 483 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 RFWD2Q8NHY2 731 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 SLC35G5Q96KT7 338 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 SDF2Q99470 211 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ELOVL5Q9NYP7 299 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 C6orf203Q9P0P8 240 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 MCTS1Q9ULC4 181 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ACTL7BQ9Y614 415 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 PRRC2AP48634 2157 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 MED13LQ71F56 2210 aa17.09■□□□□ 0.33
TNFRSF1A-212ENST00000539372 NPIPB9F8W1W9 429 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 RNASET2O00584 256 aaKnown RBP17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 SOX30O94993 753 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 GOSR1O95249 250 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ATE1O95260 518 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 SYNGR4O95473 234 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 RAF1P04049 648 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CD8BP10966 210 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 EIF1P41567 113 aaKnown RBP17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 P2RX1P51575 399 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 BST1Q10588 318 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 TOMM34Q15785 309 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ESPNLQ6ZVH7 1005 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 OLIG3Q7RTU3 272 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ZNF550Q7Z398 422 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 TMCO5AQ8N6Q1 288 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 FBXO27Q8NI29 283 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 KLHL15Q96M94 604 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 MED18Q9BUE0 208 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 PAQR5Q9NXK6 330 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ICAM5Q9UMF0 924 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 EMC9Q9Y3B6 208 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 DTNAQ9Y4J8 743 aa17.08■□□□□ 0.32
TNFRSF1A-212ENST00000539372 ABCA4P78363 2273 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 EFNA2O43921 213 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 SNUPNO95149 360 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CPSF4O95639 269 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 LBPP18428 481 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 CTBP2P56545 445 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 NME5P56597 212 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 PHC1P78364 1004 aa17.07■□□□□ 0.32
TNFRSF1A-212ENST00000539372 KEAP1Q14145 624 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms