RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 UCK1Q9HA47 277 aa16.59■□□□□ 0.25
GNE-204ENST00000539208 FOLH1BQ9HBA9 442 aa16.59■□□□□ 0.25
GNE-204ENST00000539208 TNFRSF10DQ9UBN6 386 aa16.59■□□□□ 0.25
GNE-204ENST00000539208 PLEKHB1Q9UF11 243 aaPredicted RBP16.59■□□□□ 0.25
GNE-204ENST00000539208 SCN2AQ99250 2005 aa16.59■□□□□ 0.25
GNE-204ENST00000539208 A0A0B4J2E0 115 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 A0A1B0GX12 115 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 SLC9B1P1A6NJY1 282 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 B4DGG1 531 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 CHURC1-FNTBB4DL54 471 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 CTNSO60931 367 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 CD79BP40259 229 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 EMDP50402 254 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 DEFB110Q30KQ9 67 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 COL13A1Q5TAT6 717 aaPredicted RBP16.58■□□□□ 0.25
GNE-204ENST00000539208 MEPCEQ7L2J0 689 aaKnown RBP16.58■□□□□ 0.25
GNE-204ENST00000539208 ZNF595Q8IYB9 648 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 ADAMTS18Q8TE60 1221 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 HTRA1Q92743 480 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 TCTN2Q96GX1 697 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 TPK1Q9H3S4 243 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 ATP13A2Q9NQ11 1180 aa16.58■□□□□ 0.25
GNE-204ENST00000539208 MRPS33Q9Y291 106 aaKnown RBP16.58■□□□□ 0.25
GNE-204ENST00000539208 YARS2Q9Y2Z4 477 aaKnown RBP16.58■□□□□ 0.25
GNE-204ENST00000539208 SZT2Q5T011 3432 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 SOCS6O14544 535 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 AQP9O43315 295 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 CHP2O43745 196 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 SDC2P34741 201 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 BMP8BP34820 402 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 FASLGP48023 281 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 FABP5Q01469 135 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 BDH1Q02338 343 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 NIPAL3Q6P499 406 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 BMP8AQ7Z5Y6 402 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 FAM181AQ8N9Y4 354 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 SETD6Q8TBK2 473 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 CNOT9Q92600 299 aaKnown RBP16.58■□□□□ 0.24
GNE-204ENST00000539208 RIT1Q92963 219 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 SECISBP2Q96T21 854 aaKnown RBP16.58■□□□□ 0.24
GNE-204ENST00000539208 TM9SF2Q99805 663 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 ZNF426Q9BUY5 554 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 SIGLEC7Q9Y286 467 aa16.58■□□□□ 0.24
GNE-204ENST00000539208 A0A0A6YYC8 382 aaPredicted RBP16.57■□□□□ 0.24
GNE-204ENST00000539208 H3BQ06 376 aaPredicted RBP16.57■□□□□ 0.24
GNE-204ENST00000539208 I3L1I5 382 aaPredicted RBP16.57■□□□□ 0.24
GNE-204ENST00000539208 FOXS1O43638 330 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 PTP4A3O75365 173 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 DLGAP3O95886 979 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 LALBAP00709 142 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 CHRNB1P11230 501 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 GALP22466 123 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 ATP6V1E1P36543 226 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 RBM34P42696 430 aaKnown RBP16.57■□□□□ 0.24
GNE-204ENST00000539208 MXD1Q05195 221 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 HNRNPA0Q13151 305 aaKnown RBP16.57■□□□□ 0.24
GNE-204ENST00000539208 LRIT3Q3SXY7 679 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 PDZK1Q5T2W1 519 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 SMARCD3Q6STE5 483 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 GDPD3Q7L5L3 318 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 LAX1Q8IWV1 398 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 SLC43A2Q8N370 569 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 ARIH2OSQ8N7S6 290 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 LSMEM1Q8N8F7 131 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 ZBTB8BQ8NAP8 495 aaPredicted RBP16.57■□□□□ 0.24
GNE-204ENST00000539208 RBM18Q96H35 190 aaKnown RBP16.57■□□□□ 0.24
GNE-204ENST00000539208 VSTM2LQ96N03 204 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 TRIM2Q9C040 744 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 ENKD1Q9H0I2 346 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 CMC2Q9NRP2 79 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 ASB6Q9NWX5 421 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 IRAK4Q9NWZ3 460 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 SLCO1B1Q9Y6L6 691 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 FAM86C2PA6NEL3 165 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 ZNF217O75362 1048 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 APOA1P02647 267 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 HLA-DPB1P04440 258 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 CLEC2LP0C7M8 214 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 PTNP21246 168 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 ACAA2P42765 397 aaKnown RBP16.57■□□□□ 0.24
GNE-204ENST00000539208 GPR50Q13585 617 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 FAM53BQ14153 422 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 PLBD1Q6P4A8 553 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 ZNF322Q6U7Q0 402 aaPredicted RBP16.57■□□□□ 0.24
GNE-204ENST00000539208 AP3S1Q92572 193 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 TMCO6Q96DC7 493 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 ZNF285Q96NJ3 590 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 KATNB1Q9BVA0 655 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 CHRDQ9H2X0 955 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 MEPEQ9NQ76 525 aaPredicted RBP16.57■□□□□ 0.24
GNE-204ENST00000539208 SLC2A4RGQ9NR83 387 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.57■□□□□ 0.24
GNE-204ENST00000539208 TOR4AQ9NXH8 423 aa16.57■□□□□ 0.24
GNE-204ENST00000539208 DNAJB12Q9NXW2 375 aaKnown RBP16.57■□□□□ 0.24
GNE-204ENST00000539208 FAM183AA6NL82 134 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 TGFBR3LH3BV60 316 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 HCN1O60741 890 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 CSF2P04141 144 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 SPNP16150 400 aa16.56■□□□□ 0.24
GNE-204ENST00000539208 FUT1P19526 365 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms