RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 PTOV1Q86YD1 416 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 PRR22Q8IZ63 422 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 ALDH16A1Q8IZ83 802 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 GALNT4Q8N4A0 578 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 TOR1AIP2Q8NFQ8 470 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 FDCSPQ8NFU4 85 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 OR52P1PQ8NH57 321 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 PAQR8Q8TEZ7 354 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 NR4A3Q92570 626 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 TFAP2CQ92754 450 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 MAL2Q969L2 176 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 SLC47A1Q96FL8 570 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 OTUB1Q96FW1 271 aaPredicted RBP9.4□□□□□ -0.9
CLPB-210ENST00000539148 CIB1Q99828 191 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 PINK1Q9BXM7 581 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 SLC38A1Q9H2H9 487 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 ZNF552Q9H707 407 aaPredicted RBP9.4□□□□□ -0.9
CLPB-210ENST00000539148 PTGES2Q9H7Z7 377 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 USE1Q9NZ43 259 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 B4GALT7Q9UBV7 327 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 BOKQ9UMX3 212 aaPredicted RBP9.4□□□□□ -0.9
CLPB-210ENST00000539148 MYRFQ9Y2G1 1151 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 GPC6Q9Y625 555 aaPredicted RBP9.4□□□□□ -0.9
CLPB-210ENST00000539148 PTPRQQ9UMZ3 2332 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 EML6Q6ZMW3 1958 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 LAMA5O15230 3695 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 ALG1L2C9J202 215 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 G3V2T6 193 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 M0QX08 132 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 SYT5O00445 386 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 ZNF264O43296 627 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 EIF4E2O60573 245 aaKnown RBP9.39□□□□□ -0.91
CLPB-210ENST00000539148 UGT2B11O75310 529 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 SLC25A12O75746 678 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 OR6B1O95007 311 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 CLPTM1O96005 669 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 CST1P01037 141 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 CSTAP01040 98 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 CHRM4P08173 479 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 NUDT7P0C024 238 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 PABPC4LP0CB38 370 aaKnown RBP9.39□□□□□ -0.91
CLPB-210ENST00000539148 ZNF23P17027 643 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 CNR1P21554 472 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 EVI2BP34910 448 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 CD96P40200 585 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 MAGEA2P43356 314 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 MASP1P48740 699 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 NR1H2P55055 460 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 SUMO3P55854 103 aaPredicted RBP9.39□□□□□ -0.91
CLPB-210ENST00000539148 PCBP3P57721 371 aaKnown RBP9.39□□□□□ -0.91
CLPB-210ENST00000539148 COPZ1P61923 177 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 SELENOWP63302 87 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 CHRNEQ04844 493 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 MERTKQ12866 999 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 KCNAB2Q13303 367 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 TUBA3CQ13748 450 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 DAG1Q14118 895 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 OR1C1Q15619 314 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 LRRC23Q53EV4 343 aaPredicted RBP9.39□□□□□ -0.91
CLPB-210ENST00000539148 RNF220Q5VTB9 566 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 B3GNTL1Q67FW5 361 aaPredicted RBP9.39□□□□□ -0.91
CLPB-210ENST00000539148 HMBOX1Q6NT76 420 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 TUBA3EQ6PEY2 450 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 DHRS4L2Q6PKH6 230 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 FRRS1Q6ZNA5 592 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 ZNF550Q7Z398 422 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 AMIGO2Q86SJ2 522 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 CYP4Z1Q86W10 505 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 CARM1Q86X55 608 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 CHERPQ8IWX8 916 aaKnown RBP9.39□□□□□ -0.91
CLPB-210ENST00000539148 CBR4Q8N4T8 237 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 POGLUT1Q8NBL1 392 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 PSD4Q8NDX1 1056 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 OR4N2Q8NGD1 307 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 OR5M3Q8NGP4 307 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 OR5K1Q8NHB7 308 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 C9orf43Q8TAL5 461 aaPredicted RBP9.39□□□□□ -0.91
CLPB-210ENST00000539148 ZNF347Q96SE7 839 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 FAM173AQ9BQD7 235 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 DOHHQ9BU89 302 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 TRIM8Q9BZR9 551 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 SEMA6AQ9H2E6 1030 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 LIN28AQ9H9Z2 209 aaKnown RBP9.39□□□□□ -0.91
CLPB-210ENST00000539148 IL1RAPQ9NPH3 570 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 PPP4R1LQ9P1A2 415 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 ENOPH1Q9UHY7 261 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 BLOC1S6Q9UL45 172 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 ZMIZ1Q9ULJ6 1067 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 OAZ3Q9UMX2 235 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 KCNE3Q9Y6H6 103 aa9.39□□□□□ -0.91
CLPB-210ENST00000539148 FREM2Q5SZK8 3169 aa9.38□□□□□ -0.91
CLPB-210ENST00000539148 SMG1Q96Q15 3661 aaKnown RBP9.38□□□□□ -0.91
CLPB-210ENST00000539148 DMXL2Q8TDJ6 3036 aa9.38□□□□□ -0.91
CLPB-210ENST00000539148 SERINC4A6NH21 518 aa9.38□□□□□ -0.91
CLPB-210ENST00000539148 ACOT7O00154 380 aa9.38□□□□□ -0.91
CLPB-210ENST00000539148 TAF4O00268 1085 aa9.38□□□□□ -0.91
CLPB-210ENST00000539148 FCMRO60667 390 aa9.38□□□□□ -0.91
CLPB-210ENST00000539148 ICOSLGO75144 302 aa9.38□□□□□ -0.91
CLPB-210ENST00000539148 OXSR1O95747 527 aaPredicted RBP9.38□□□□□ -0.91
CLPB-210ENST00000539148 ZNF682O95780 498 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms