RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 A0A1B0GX78 115 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 ZC3H12DA2A288 527 aaKnown RBP13.02□□□□□ -0.33
ACTN1-205ENST00000538545 TRAPPC13A5PLN9 417 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 SLITRK5O94991 958 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 WISP1O95388 367 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 DDAH2O95865 285 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 CCNA2P20248 432 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 ACVR2AP27037 513 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 GCGRP47871 477 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 CCR4P51679 360 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 CLDN6P56747 220 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 CDK5Q00535 292 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 TSPAN31Q12999 210 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 MED22Q15528 200 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 EIPR1Q53HC9 387 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 COX15Q7KZN9 410 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 OR13C2Q8NGS9 318 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 HOXB13Q92826 284 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-205ENST00000538545 PMEPA1Q969W9 287 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 SH3YL1Q96HL8 342 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-205ENST00000538545 OCEL1Q9H607 264 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 PCDHGB1Q9Y5G3 927 aa13.02□□□□□ -0.33
ACTN1-205ENST00000538545 CCDC163A0A0D9SF12 145 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 OR5F1O95221 314 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 ZGLP1P0C6A0 271 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 CD36P16671 472 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 PCYT1AP49585 367 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 ZNF91Q05481 1191 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 DSG2Q14126 1118 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 NR1D2Q14995 579 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 SYT14P1Q58G82 188 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 THSD4Q6ZMP0 1018 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 MBOAT2Q6ZWT7 520 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 WDR36Q8NI36 951 aaKnown RBP13.01□□□□□ -0.33
ACTN1-205ENST00000538545 TEX47Q8TBZ9 253 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 GNPDA2Q8TDQ7 276 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 TMEM239Q8WW34 195 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 MED20Q9H944 212 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 TBC1D23Q9NUY8 699 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 FKBP14Q9NWM8 211 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 LOC400499M0QZD8 3231 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 IGKV3D-11A0A0A0MRZ8 115 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 TEX51A0A1B0GUA7 166 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 IFNA8P32881 189 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 DAB2P98082 770 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 DECR1Q16698 335 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 SYT6Q5T7P8 510 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-205ENST00000538545 FAM199XQ6PEV8 388 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-205ENST00000538545 KIRREL2Q6UWL6 708 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 PRSS42Q7Z5A4 293 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 C9orf40Q8IXQ3 194 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 OR5M3Q8NGP4 307 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 IFI44Q8TCB0 444 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 STT3BQ8TCJ2 826 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 ZNF721Q8TF20 911 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 PLCXD1Q9NUJ7 323 aa13.01□□□□□ -0.33
ACTN1-205ENST00000538545 CSTAP01040 98 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 DRD5P21918 477 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 HOXA6P31267 233 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 TGFBR2P37173 567 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 NR0B1P51843 470 aaKnown RBP13□□□□□ -0.33
ACTN1-205ENST00000538545 SLC27A4Q6P1M0 643 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 GHDCQ8N2G8 530 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 LRRC17Q8N6Y2 441 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 IPCEF1Q8WWN9 437 aaPredicted RBP13□□□□□ -0.33
ACTN1-205ENST00000538545 NACC2Q96BF6 587 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 DUSP23Q9BVJ7 150 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 SLC25A19Q9HC21 320 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 ENPP5Q9UJA9 477 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 WWP2O00308 870 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 DSCR3O14972 297 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 NOL3O60936 208 aaKnown RBP13□□□□□ -0.33
ACTN1-205ENST00000538545 SAGP10523 405 aaPredicted RBP13□□□□□ -0.33
ACTN1-205ENST00000538545 DBTP11182 482 aaKnown RBP13□□□□□ -0.33
ACTN1-205ENST00000538545 CDK4P11802 303 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 TTKP33981 857 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 RPS3AP61247 264 aaKnown RBP13□□□□□ -0.33
ACTN1-205ENST00000538545 ROR2Q01974 943 aaKnown RBP13□□□□□ -0.33
ACTN1-205ENST00000538545 COX10Q12887 443 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 TIGD6Q17RP2 521 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 ALG10BQ5I7T1 473 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 IGFN1Q86VF2 1251 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 SLC34A3Q8N130 599 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 OR8J1Q8NGP2 316 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 ZNF420Q8TAQ5 688 aaPredicted RBP13□□□□□ -0.33
ACTN1-205ENST00000538545 MYDGFQ969H8 173 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 C8orf44Q96CB5 159 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 YIPF6Q96EC8 236 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 CHRNA10Q9GZZ6 450 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 CCNB1IP1Q9NPC3 277 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 CACNA1CQ13936 2221 aa13□□□□□ -0.33
ACTN1-205ENST00000538545 SCRG1O75711 98 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 CD79BP40259 229 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 ATP12AP54707 1039 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 SERTAD2Q14140 314 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 POMZP3Q6PJE2 187 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 MAMSTRQ6ZN01 415 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 ZNF620Q6ZNG0 422 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 PHOSPHO1Q8TCT1 267 aa12.99□□□□□ -0.33
ACTN1-205ENST00000538545 ZNF582Q96NG8 517 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms