RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 NEIL3Q8TAT5 605 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 PHOSPHO1Q8TCT1 267 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 UGT2B28Q9BY64 529 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 ACKR4Q9NPB9 350 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 PNPLA3Q9NST1 481 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 RLIMQ9NVW2 624 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 QPCTLQ9NXS2 382 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 DNAJB12Q9NXW2 375 aaKnown RBP11.86□□□□□ -0.51
CHFR-216ENST00000538235 SH3BGRL2Q9UJC5 107 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 TRGV5A0A0B4J1U4 118 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 NPIPA2E9PIF3 369 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 NPIPA3F8WFD2 350 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 SCDO00767 359 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 AQP7O14520 342 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 FRS3O43559 492 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 SLC19A2O60779 497 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 DNAJA2O60884 412 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 TRAPPC6AO75865 159 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 PGM3O95394 542 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 AGR2O95994 175 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 OPN1SWP03999 348 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 LINGO3P0C6S8 592 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 PRG2P13727 222 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 BMP7P18075 431 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 DPP4P27487 766 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 AQP1P29972 269 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 NUDT2P50583 147 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 FOXF1Q12946 379 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 SCARB2Q14108 478 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 CDSNQ15517 529 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 MAPRE2Q15555 327 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 MRPL2Q5T653 305 aaKnown RBP11.85□□□□□ -0.51
CHFR-216ENST00000538235 ATAD3BQ5T9A4 648 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 BNC2Q6ZN30 1099 aaPredicted RBP11.85□□□□□ -0.51
CHFR-216ENST00000538235 CD163Q86VB7 1156 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 SLC15A3Q8IY34 581 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 GPR32P1Q8NGA4 272 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 OR4K17Q8NGC6 315 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 OR5M9Q8NGP3 310 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 RELTQ969Z4 430 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 ZNF583Q96ND8 569 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 TMEM38AQ9H6F2 299 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 BCL2L10Q9HD36 194 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 POLE3Q9NRF9 147 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 MED17Q9NVC6 651 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 ERRFI1Q9UJM3 462 aaPredicted RBP11.85□□□□□ -0.51
CHFR-216ENST00000538235 LIPT1Q9Y234 373 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 VDAC3Q9Y277 283 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 FAM215AQ9Y5M1 114 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 DOPEY2Q9Y3R5 2298 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 COL12A1Q99715 3063 aa11.85□□□□□ -0.51
CHFR-216ENST00000538235 INTS1Q8N201 2190 aaKnown RBP11.84□□□□□ -0.51
CHFR-216ENST00000538235 LRRK2Q5S007 2527 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 OR2M5A3KFT3 312 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 HCRTR2O43614 444 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 CBR3O75828 277 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 NTN1O95631 604 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 STSP08842 583 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 UBTFL6P0CB48 400 aaPredicted RBP11.84□□□□□ -0.51
CHFR-216ENST00000538235 UBL4AP11441 157 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 PRDX6P30041 224 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 ADH7P40394 386 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 MAGEA8P43361 318 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 LHX2P50458 406 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 SLC7A2P52569 658 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 CLDN18P56856 261 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 TXNL4AP83876 142 aaKnown RBP11.84□□□□□ -0.51
CHFR-216ENST00000538235 CDK6Q00534 326 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 C17orf67Q0P5P2 114 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 SLC10A1Q14973 349 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 MMEL1Q495T6 779 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 VASNQ6EMK4 673 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 SEM1Q6ZVN7 128 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 TSPYL5Q86VY4 417 aaPredicted RBP11.84□□□□□ -0.51
CHFR-216ENST00000538235 DOLPP1Q86YN1 238 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 CCDC197Q8NCU1 140 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 OR8J3Q8NGG0 315 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 OR4D11Q8NGI4 311 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 B4GALNT2Q8NHY0 566 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 PRR7Q8TB68 274 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 FAM57AQ8TBR7 257 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 GPR119Q8TDV5 335 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 WDR60Q8WVS4 1066 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 TAMM41Q96BW9 452 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 TAS2R10Q9NYW0 307 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 DKKL1Q9UK85 242 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 ZNF443Q9Y2A4 671 aaPredicted RBP11.84□□□□□ -0.51
CHFR-216ENST00000538235 PCDHGB3Q9Y5G1 929 aa11.84□□□□□ -0.51
CHFR-216ENST00000538235 GPC6Q9Y625 555 aaPredicted RBP11.84□□□□□ -0.51
CHFR-216ENST00000538235 DOPEY1Q5JWR5 2465 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 CDHR4A6H8M9 788 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 ZNF264O43296 627 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 SUSD5O60279 629 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 HCN1O60741 890 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 CSTAP01040 98 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 NID1P14543 1247 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 HK1P19367 917 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 PPIBP23284 216 aaKnown RBP11.83□□□□□ -0.52
CHFR-216ENST00000538235 PCGF2P35227 344 aa11.83□□□□□ -0.52
CHFR-216ENST00000538235 PTGS2P35354 604 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms