RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SNNO75324 88 aaPredicted RBP6.65□□□□□ -1.35
MSH6-209ENST00000538136 TNFRSF21O75509 655 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 GYPBP06028 91 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 DHRS4L1P0CG22 281 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 EDN3P14138 238 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 FUT1P19526 365 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 STT3AP46977 705 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 PRSS12P56730 875 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 CAMK2DQ13557 499 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 TOMM34Q15785 309 aaPredicted RBP6.65□□□□□ -1.35
MSH6-209ENST00000538136 CDKL4Q5MAI5 379 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 WFDC8Q8IUA0 241 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 FUNDC1Q8IVP5 155 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 BCORP1Q8N888 145 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 OR6Y1Q8NGX8 325 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 PTPMT1Q8WUK0 201 aaPredicted RBP6.65□□□□□ -1.35
MSH6-209ENST00000538136 GTF2H4Q92759 462 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 SPACA9Q96E40 222 aaPredicted RBP6.65□□□□□ -1.35
MSH6-209ENST00000538136 TEX12Q9BXU0 123 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 SSU72Q9NP77 194 aaKnown RBP6.65□□□□□ -1.35
MSH6-209ENST00000538136 WARS2Q9UGM6 360 aaKnown RBP6.65□□□□□ -1.35
MSH6-209ENST00000538136 PRDM4Q9UKN5 801 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 B3GNT3Q9Y2A9 372 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 ATRQ13535 2644 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 A0A1W2PPL8 197 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 PRORSD1PA6NEY8 169 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 M0R3G1 203 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 FASP25445 335 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 EMP3P54852 163 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 CLDN15P56746 228 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 PMPCAQ10713 525 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 PON3Q15166 354 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 QPRTQ15274 297 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 PLEKHN1Q494U1 663 aaPredicted RBP6.65□□□□□ -1.35
MSH6-209ENST00000538136 SERPINA11Q86U17 422 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 SLC22A16Q86VW1 577 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 ZDHHC13Q8IUH4 622 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 LRRC18Q8N456 261 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 THAP4Q8WY91 577 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 SLC38A4Q969I6 547 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 ANKRD9Q96BM1 317 aaPredicted RBP6.65□□□□□ -1.35
MSH6-209ENST00000538136 NODALQ96S42 347 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 PELOQ9BRX2 385 aaKnown RBP6.65□□□□□ -1.35
MSH6-209ENST00000538136 MED18Q9BUE0 208 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 CHID1Q9BWS9 393 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 UCK2Q9BZX2 261 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 SLC25A18Q9H1K4 315 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 NANSQ9NR45 359 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 SDR39U1Q9NRG7 319 aaPredicted RBP6.65□□□□□ -1.35
MSH6-209ENST00000538136 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.65□□□□□ -1.35
MSH6-209ENST00000538136 TVP23BQ9NYZ1 205 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 FBXL2Q9UKC9 423 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 RRP15Q9Y3B9 282 aaKnown RBP6.65□□□□□ -1.35
MSH6-209ENST00000538136 MMACHCQ9Y4U1 282 aa6.65□□□□□ -1.35
MSH6-209ENST00000538136 PRRC2AP48634 2157 aaKnown RBP6.65□□□□□ -1.35
MSH6-209ENST00000538136 C21orf140B9A014 251 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 TNFSF11O14788 317 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 CLIC3O95833 236 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 UMODP07911 640 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 PNLIPP16233 465 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 PGCP20142 388 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 NAA20P61599 178 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 RAE1P78406 368 aaKnown RBP6.64□□□□□ -1.35
MSH6-209ENST00000538136 MELKQ14680 651 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 DUSP7Q16829 419 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 CRB2Q5IJ48 1285 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 CGB2Q6NT52 195 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 SH2D5Q6ZV89 423 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 PIP4P1Q86T03 277 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 ZBTB46Q86UZ6 589 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 ZZZ3Q8IYH5 903 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 ADAMTS16Q8TE57 1224 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 OSTF1Q92882 214 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 DPH1Q9BZG8 443 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 AASSQ9UDR5 926 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 BAHCC1Q9P281 2608 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 TRAV27A0A087WT01 109 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 TRGV5A0A0B4J1U4 118 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 SLC35F4A4IF30 521 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 ANKUB1A6NFN9 424 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 CYR61O00622 381 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 ZNF264O43296 627 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 ZG16O60844 167 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 MRPL3P09001 348 aaKnown RBP6.64□□□□□ -1.35
MSH6-209ENST00000538136 ZNF43P17038 809 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 GPX3P22352 226 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 KDELR2P33947 212 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 RPS27P42677 84 aaKnown RBP6.64□□□□□ -1.35
MSH6-209ENST00000538136 PRKXP51817 358 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 TUBA1BP68363 451 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 TUBA4AP68366 448 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 POU3F1Q03052 451 aaPredicted RBP6.64□□□□□ -1.35
MSH6-209ENST00000538136 DMTNQ08495 405 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 VMACQ2NL98 169 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 UGT3A2Q3SY77 523 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 IFI44LQ53G44 452 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 TYW3Q6IPR3 259 aaKnown RBP6.64□□□□□ -1.35
MSH6-209ENST00000538136 TBPL2Q6SJ96 375 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 TUBA1AQ71U36 451 aa6.64□□□□□ -1.35
MSH6-209ENST00000538136 OAFQ86UD1 273 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms