RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SIT1Q9Y3P8 196 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 NCOR1O75376 2440 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 TMEM129A0AVI4 362 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 URADA6NGE7 173 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 FAM72CH0Y354 149 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 SEMA7AO75326 666 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 GP1BAP07359 652 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 COX5BP10606 129 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 OSMP13725 252 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 ETV5P41161 510 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 OCLNQ16625 522 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 NKAPLQ5M9Q1 402 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 FAM72AQ5TYM5 149 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 FAM72DQ6L9T8 149 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 FAM72BQ86X60 149 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 DMRTC2Q8IXT2 367 aaPredicted RBP10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 RHOVQ96L33 236 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 TSSK3Q96PN8 268 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 DPH2Q9BQC3 489 aaPredicted RBP10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 VSX1Q9NZR4 365 aaPredicted RBP10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 LAMP5Q9UJQ1 280 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 CBLCQ9ULV8 474 aa10.19□□□□□ -0.78
CLSTN3-207ENST00000537408 COL11A1P12107 1806 aaPredicted RBP10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 A0A0D9SG52 128 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 NEDD8-MDP1E9PL57 170 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 G3V3Q6 166 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 MATN3O15232 486 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 ICOSLGO75144 302 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 UBL3O95164 117 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 ADAP00813 363 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 IL9P15248 144 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 BCL2L1Q07817 233 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 HFE2Q6ZVN8 426 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 SLC29A4Q7RTT9 530 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 SZRD1Q7Z422 152 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 C10orf111Q8N326 155 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 PSMG2Q969U7 264 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 SENP5Q96HI0 755 aaPredicted RBP10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 NPY6RQ99463 290 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 CHRDQ9H2X0 955 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 TVP23BQ9NYZ1 205 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 KCNIP3Q9Y2W7 256 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 SNX10Q9Y5X0 201 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 CLDN4O14493 209 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 KLK8O60259 260 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 GALR3O60755 368 aaPredicted RBP10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 EIF4EP06730 217 aaKnown RBP10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 GNSP15586 552 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 NQO2P16083 231 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 SELENOWP63302 87 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 CDC73Q6P1J9 531 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 Q6ZTK2 550 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 TPRA1Q86W33 373 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 KLHDC8BQ8IXV7 354 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 PNPLA1Q8N8W4 532 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 BOLLQ8N9W6 283 aaKnown RBP10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 ZNF383Q8NA42 475 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 AVL9Q8NBF6 648 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 OR5T3Q8NGG3 340 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 OR4C15Q8NGM1 316 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 GEMIN6Q8WXD5 167 aaKnown RBP10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 OVCA2Q8WZ82 227 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 C14orf79Q96F83 325 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 GPR21Q99679 349 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 C1GALT1Q9NS00 363 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 MARCH5Q9NX47 278 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 CARHSP1Q9Y2V2 147 aaKnown RBP10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 AP4M1O00189 453 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 LAMP2P13473 410 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 ITGA3P26006 1051 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 CORO1AP31146 461 aaKnown RBP10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 MTNR1BP49286 362 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 PPA1Q15181 289 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 FAM46CQ5VWP2 391 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 KCTD13Q8WZ19 329 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 PNPLA2Q96AD5 504 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 RGMAQ96B86 450 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 LINGO1Q96FE5 620 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 ADAT1Q9BUB4 502 aaKnown RBP10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 TMEM138Q9NPI0 162 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 PIGVQ9NUD9 493 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 PCDHB9Q9Y5E1 797 aa10.18□□□□□ -0.78
CLSTN3-207ENST00000537408 THSD7BQ9C0I4 1608 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 MEX3AA1L020 520 aaKnown RBP10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 CD8B2A6NJW9 211 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 C1QTNF3-AMACRE9PGA6 284 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 CD8BP10966 210 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 CD86P42081 329 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 OR2G6Q5TZ20 316 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 ADNP2Q6IQ32 1131 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 LIN54Q6MZP7 749 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 TMEM200AQ86VY9 491 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 ZFP41Q8N8Y5 198 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 OR4L1Q8NH43 312 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 SNRPGP15A8MWD9 76 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 LINC01565O15544 149 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 TLX2O43763 284 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 RPP40O75818 363 aaKnown RBP10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 TBX18O95935 607 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 GPR15P49685 360 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms