RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CDKN2CP42773 168 aa16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 PRIM2P49643 509 aa16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 CLK3P49761 638 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 DLX5P56178 289 aa16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 GANABQ14697 944 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 PLXDC2Q6UX71 529 aa16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 COX18Q8N8Q8 333 aa16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 C9orf106Q8NAJ2 232 aa16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 RP9Q8TA86 221 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 JADE3Q92613 823 aa16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 STACQ99469 402 aa16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 SLC35A5Q9BS91 424 aa16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 DUSP22Q9NRW4 184 aa16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 GPATCH2Q9NW75 528 aa16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 ABCA4P78363 2273 aa16.16■□□□□ 0.18
TNFRSF1A-209ENST00000536717 A0A096LPI6 279 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 BBIP1A8MTZ0 92 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 ALG1L2C9J202 215 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 H0Y3Z8 333 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 DVL2O14641 736 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 GSNP06396 782 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 NGFRP08138 427 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 ZCCHC18P0CG32 403 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 CHI3L1P36222 383 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 C17orf67Q0P5P2 114 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 PAGE3Q5JUK9 113 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 CCNJQ5T5M9 372 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 CDC73Q6P1J9 531 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 CDS1Q92903 461 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 CMTM5Q96DZ9 223 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 C1GALT1C1Q96EU7 318 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 UCN2Q96RP3 112 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 PIGUQ9H490 435 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 GIN1Q9NXP7 522 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 CLCF1Q9UBD9 225 aa16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 ZNF629Q9UEG4 869 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 FAF1Q9UNN5 650 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-209ENST00000536717 CLCA1A8K7I4 914 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 KRT16P08779 473 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 HK1P19367 917 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 TBXA2RP21731 343 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 KRTAP10-9P60411 292 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 POU6F2P78424 691 aaPredicted RBP16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 TLE4Q04727 773 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 COQ5Q5HYK3 327 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 RAET1LQ5VY80 246 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 C6orf120Q7Z4R8 191 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 TREML1Q86YW5 311 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 CLEC4FQ8N1N0 589 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 DPP10Q8N608 796 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 LURAP1Q96LR2 239 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 BTBD2Q9BX70 525 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 ACTRT3Q9BYD9 372 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 PTGES2Q9H7Z7 377 aa16.14■□□□□ 0.18
TNFRSF1A-209ENST00000536717 COX4I1P13073 169 aa16.14■□□□□ 0.17
TNFRSF1A-209ENST00000536717 CLDN15P56746 228 aa16.14■□□□□ 0.17
TNFRSF1A-209ENST00000536717 LRIF1Q5T3J3 769 aa16.14■□□□□ 0.17
TNFRSF1A-209ENST00000536717 POU5F2Q8N7G0 328 aa16.14■□□□□ 0.17
TNFRSF1A-209ENST00000536717 PCYOX1LQ8NBM8 494 aa16.14■□□□□ 0.17
TNFRSF1A-209ENST00000536717 OR5M1Q8NGP8 315 aa16.14■□□□□ 0.17
TNFRSF1A-209ENST00000536717 NEURL3Q96EH8 262 aa16.14■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SLC35G5Q96KT7 338 aa16.14■□□□□ 0.17
TNFRSF1A-209ENST00000536717 PAIP1Q9H074 479 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-209ENST00000536717 ZNF337Q9Y3M9 751 aa16.14■□□□□ 0.17
TNFRSF1A-209ENST00000536717 L3MBTL1Q9Y468 752 aa16.14■□□□□ 0.17
TNFRSF1A-209ENST00000536717 PCDHB14Q9Y5E9 798 aa16.14■□□□□ 0.17
TNFRSF1A-209ENST00000536717 KCNE3Q9Y6H6 103 aa16.14■□□□□ 0.17
TNFRSF1A-209ENST00000536717 OTOGQ6ZRI0 2925 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 OR2M5A3KFT3 312 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 FBP2O00757 339 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 NDUFB5O43674 189 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 GMFGO60234 142 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 KRT75O95678 551 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 PEPDP12955 493 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 CTSSP25774 331 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 PRDX6P30041 224 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 LCN1P31025 176 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 ASCL1P50553 236 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 AGFG1P52594 562 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 CBX1P83916 185 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 FOXF2Q12947 444 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 NFYCQ13952 458 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 BCL2A1Q16548 175 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 FBXL19-AS1Q494R0 122 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SAXO2Q658L1 398 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 REP15Q6BDI9 236 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 ARSKQ6UWY0 536 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 DHDDSQ86SQ9 333 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 RETREG3Q86VR2 466 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 LURAP1LQ8IV03 231 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 GATSQ8NAP1 163 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 MCCC2Q9HCC0 563 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 UBQLN4Q9NRR5 601 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SLC6A13Q9NSD5 602 aa16.13■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SYT5O00445 386 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 MRASO14807 208 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 HCRTR2O43614 444 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SOX30O94993 753 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 MATN1P21941 496 aa16.12■□□□□ 0.17
TNFRSF1A-209ENST00000536717 SUCLG1P53597 346 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms