RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 PLEKHM3Q6ZWE6 761 aa18.41■□□□□ 0.54
LTBR-205ENST00000535739 C4orf33Q8N1A6 199 aa18.41■□□□□ 0.54
LTBR-205ENST00000535739 COX18Q8N8Q8 333 aa18.41■□□□□ 0.54
LTBR-205ENST00000535739 PKNOX2Q96KN3 472 aa18.41■□□□□ 0.54
LTBR-205ENST00000535739 HHATLQ9HCP6 504 aa18.41■□□□□ 0.54
LTBR-205ENST00000535739 PPP3CBP16298 524 aa18.4■□□□□ 0.54
LTBR-205ENST00000535739 PTH2RP49190 550 aa18.4■□□□□ 0.54
LTBR-205ENST00000535739 EXOSC6Q5RKV6 272 aaKnown RBP18.4■□□□□ 0.54
LTBR-205ENST00000535739 KANK2Q63ZY3 851 aa18.4■□□□□ 0.54
LTBR-205ENST00000535739 ZNF704Q6ZNC4 412 aaPredicted RBP18.4■□□□□ 0.54
LTBR-205ENST00000535739 RNF165Q6ZSG1 346 aa18.4■□□□□ 0.54
LTBR-205ENST00000535739 GOLGA6L1Q8N7Z2 621 aa18.4■□□□□ 0.54
LTBR-205ENST00000535739 B4GALNT2Q8NHY0 566 aa18.4■□□□□ 0.54
LTBR-205ENST00000535739 IGFBPL1Q8WX77 278 aa18.4■□□□□ 0.54
LTBR-205ENST00000535739 JADE3Q92613 823 aa18.4■□□□□ 0.54
LTBR-205ENST00000535739 FAM120BQ96EK7 910 aaKnown RBP18.4■□□□□ 0.54
LTBR-205ENST00000535739 GSX2Q9BZM3 304 aa18.4■□□□□ 0.54
LTBR-205ENST00000535739 C12orf49Q9H741 205 aa18.4■□□□□ 0.54
LTBR-205ENST00000535739 GLRX2Q9NS18 164 aa18.4■□□□□ 0.54
LTBR-205ENST00000535739 SIRT3Q9NTG7 399 aaPredicted RBP18.4■□□□□ 0.54
LTBR-205ENST00000535739 DNAJC15Q9Y5T4 150 aa18.4■□□□□ 0.54
LTBR-205ENST00000535739 TMEM233B4DJY2 109 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 SCDO00767 359 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 CHEK2O96017 543 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 BCKDHAP12694 445 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 ME2P23368 584 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 SHC1P29353 583 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 SERPINB4P48594 390 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 PRIM2P49643 509 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 POU6F2P78424 691 aaPredicted RBP18.39■□□□□ 0.53
LTBR-205ENST00000535739 TNFAIP8L3Q5GJ75 292 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 ZCCHC12Q6PEW1 402 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 BEND4Q6ZU67 534 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 WFDC8Q8IUA0 241 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 MISPQ8IVT2 679 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 LILRA2Q8N149 483 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 NUDT8Q8WV74 236 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 ROBO4Q8WZ75 1007 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 OSTF1Q92882 214 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 CHMP6Q96FZ7 201 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 PLPPR2Q96GM1 343 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 BTBD2Q9BX70 525 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 ACTR6Q9GZN1 396 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 TMED5Q9Y3A6 229 aa18.39■□□□□ 0.53
LTBR-205ENST00000535739 A0A1W2PQD3 144 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 TRIM13O60858 407 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 HMGN2P05204 90 aaKnown RBP18.38■□□□□ 0.53
LTBR-205ENST00000535739 CHRNGP07510 517 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 LINGO3P0C6S8 592 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 PCSK6P29122 969 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 AGTR1P30556 359 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 LCN1P31025 176 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 SFTPDP35247 375 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 ASMTP46597 345 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 RNF144AP50876 292 aaPredicted RBP18.38■□□□□ 0.53
LTBR-205ENST00000535739 CARD18P57730 90 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 PDSS1Q5T2R2 415 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 TRABD2AQ86V40 505 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 DDIASQ8IXT1 998 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 OR7A2PQ8NGA2 310 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 CDS1Q92903 461 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 ARL8AQ96BM9 186 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 MTERF3Q96E29 417 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 KLHL15Q96M94 604 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 TRMOQ9BU70 441 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 FANCFQ9NPI8 374 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 ZCCHC3Q9NUD5 404 aaKnown RBP18.38■□□□□ 0.53
LTBR-205ENST00000535739 GIN1Q9NXP7 522 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 GIMAP2Q9UG22 337 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 MID2Q9UJV3 735 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 CADP27708 2225 aa18.38■□□□□ 0.53
LTBR-205ENST00000535739 NPIPA5A0A0B4J1W7 369 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 NPIPA7E9PJI5 369 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 OIP5O43482 229 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 EFNA2O43921 213 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 CNOT4O95628 575 aaKnown RBP18.37■□□□□ 0.53
LTBR-205ENST00000535739 NPIPA8P0DM63 369 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 NR1H2P55055 460 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 ZNF117Q03924 483 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 FOXF1Q12946 379 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 LASP1Q14847 261 aaKnown RBP18.37■□□□□ 0.53
LTBR-205ENST00000535739 UGT3A2Q3SY77 523 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 AGBL2Q5U5Z8 902 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 ALKBH2Q6NS38 261 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 R3HCC1LQ7Z5L2 792 aaKnown RBP18.37■□□□□ 0.53
LTBR-205ENST00000535739 STK32CQ86UX6 486 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 PHOSPHO1Q8TCT1 267 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 TMEM171Q8WVE6 324 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 TWIST2Q8WVJ9 160 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 ATP6V1HQ9UI12 483 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 GPR52Q9Y2T5 361 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 SNX8Q9Y5X2 465 aa18.37■□□□□ 0.53
LTBR-205ENST00000535739 PIP5K1BO14986 540 aa18.36■□□□□ 0.53
LTBR-205ENST00000535739 SCAMP2O15127 329 aaKnown RBP18.36■□□□□ 0.53
LTBR-205ENST00000535739 NTN1O95631 604 aa18.36■□□□□ 0.53
LTBR-205ENST00000535739 LAMP1P11279 417 aa18.36■□□□□ 0.53
LTBR-205ENST00000535739 PSMB1P20618 241 aaKnown RBP18.36■□□□□ 0.53
LTBR-205ENST00000535739 MLC1Q15049 377 aa18.36■□□□□ 0.53
LTBR-205ENST00000535739 GTF2IRD2BQ6EKJ0 949 aa18.36■□□□□ 0.53
LTBR-205ENST00000535739 CBLN3Q6UW01 205 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms