RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 CALHM3Q86XJ0 350 aa11.88□□□□□ -0.51
CHFR-210ENST00000535527 VRK2Q86Y07 508 aa11.88□□□□□ -0.51
CHFR-210ENST00000535527 OR1J4Q8NGS1 313 aa11.88□□□□□ -0.51
CHFR-210ENST00000535527 CNOT9Q92600 299 aaKnown RBP11.88□□□□□ -0.51
CHFR-210ENST00000535527 TRNT1Q96Q11 434 aaKnown RBP11.88□□□□□ -0.51
CHFR-210ENST00000535527 G6PC3Q9BUM1 346 aa11.88□□□□□ -0.51
CHFR-210ENST00000535527 TBL1XR1Q9BZK7 514 aa11.88□□□□□ -0.51
CHFR-210ENST00000535527 KAT8Q9H7Z6 458 aaKnown RBP11.88□□□□□ -0.51
CHFR-210ENST00000535527 UBQLN4Q9NRR5 601 aa11.88□□□□□ -0.51
CHFR-210ENST00000535527 AGPAT4Q9NRZ5 378 aa11.88□□□□□ -0.51
CHFR-210ENST00000535527 PPP4R1LQ9P1A2 415 aa11.88□□□□□ -0.51
CHFR-210ENST00000535527 TINAGQ9UJW2 476 aa11.88□□□□□ -0.51
CHFR-210ENST00000535527 ICAM5Q9UMF0 924 aa11.88□□□□□ -0.51
CHFR-210ENST00000535527 AKAP9Q99996 3911 aa11.88□□□□□ -0.51
CHFR-210ENST00000535527 CSMD2Q7Z408 3487 aa11.88□□□□□ -0.51
CHFR-210ENST00000535527 SERINC4A6NH21 518 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 AGAP5A6NIR3 686 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 DUXAA6NLW8 204 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 CCT8L1PA6NM43 557 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 BBIP1A8MTZ0 92 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 NME4O00746 187 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 EFNA2O43921 213 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 CCDC22O60826 627 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 AK1P00568 194 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 GUSBP08236 651 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 PSMA4P25789 261 aaKnown RBP11.87□□□□□ -0.51
CHFR-210ENST00000535527 LCN1P31025 176 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 PSMD4P55036 377 aaKnown RBP11.87□□□□□ -0.51
CHFR-210ENST00000535527 GFRA1P56159 465 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 CLDN15P56746 228 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 RPP38P78345 283 aaKnown RBP11.87□□□□□ -0.51
CHFR-210ENST00000535527 CRYZQ08257 329 aaKnown RBP11.87□□□□□ -0.51
CHFR-210ENST00000535527 FADDQ13158 208 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 CYLC2Q14093 348 aaPredicted RBP11.87□□□□□ -0.51
CHFR-210ENST00000535527 GCNT6Q5T4J0 391 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 FAM91A1Q658Y4 838 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 SP5Q6BEB4 398 aaPredicted RBP11.87□□□□□ -0.51
CHFR-210ENST00000535527 C3P1Q6ZMU1 363 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 LRRC74BQ6ZQY2 392 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 PACS2Q86VP3 889 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 MARVELD2Q8N4S9 558 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 ZNF614Q8N883 585 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 ANKS4BQ8N8V4 417 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 RP9Q8TA86 221 aaKnown RBP11.87□□□□□ -0.51
CHFR-210ENST00000535527 C1GALT1C1Q96EU7 318 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 TREX2Q9BQ50 279 aaPredicted RBP11.87□□□□□ -0.51
CHFR-210ENST00000535527 PIF1Q9H611 641 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 EXD2Q9NVH0 621 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 P2RX2Q9UBL9 471 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 MRTO4Q9UKD2 239 aaKnown RBP11.87□□□□□ -0.51
CHFR-210ENST00000535527 PACSIN3Q9UKS6 424 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 OSGIN2Q9Y236 505 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 CARD8Q9Y2G2 431 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 RPH3AQ9Y2J0 694 aaPredicted RBP11.87□□□□□ -0.51
CHFR-210ENST00000535527 DTNAQ9Y4J8 743 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 HIVEP1P15822 2718 aa11.87□□□□□ -0.51
CHFR-210ENST00000535527 CACNA1CQ13936 2221 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 NF1P21359 2839 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 TMEM229AB2RXF0 380 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 H0YC42 278 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 ACOT7O00154 380 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 AP3D1O14617 1153 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 AIM2O14862 343 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 NDUFB5O43674 189 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 TPST1O60507 370 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 T-ENOLP0DO92 83 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 NR2F1P10589 423 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 ATP6V1C1P21283 382 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 SHC1P29353 583 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 SRD5A2P31213 254 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 STARP49675 285 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 TPD52P55327 224 aaPredicted RBP11.86□□□□□ -0.51
CHFR-210ENST00000535527 PCBP3P57721 371 aaKnown RBP11.86□□□□□ -0.51
CHFR-210ENST00000535527 EEF1A1P68104 462 aaKnown RBP11.86□□□□□ -0.51
CHFR-210ENST00000535527 PLPPR5Q32ZL2 321 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 RTL6Q6ICC9 239 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 Q6ZPB1 254 aaPredicted RBP11.86□□□□□ -0.51
CHFR-210ENST00000535527 MCEMP1Q8IX19 187 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 GHDCQ8N2G8 530 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 CLIP4Q8N3C7 705 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 OR10A6Q8NH74 314 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 NEIL3Q8TAT5 605 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 PHOSPHO1Q8TCT1 267 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 UGT2B28Q9BY64 529 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 ACKR4Q9NPB9 350 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 PNPLA3Q9NST1 481 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 RLIMQ9NVW2 624 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 QPCTLQ9NXS2 382 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 DNAJB12Q9NXW2 375 aaKnown RBP11.86□□□□□ -0.51
CHFR-210ENST00000535527 SH3BGRL2Q9UJC5 107 aa11.86□□□□□ -0.51
CHFR-210ENST00000535527 TRGV5A0A0B4J1U4 118 aa11.85□□□□□ -0.51
CHFR-210ENST00000535527 NPIPA2E9PIF3 369 aa11.85□□□□□ -0.51
CHFR-210ENST00000535527 NPIPA3F8WFD2 350 aa11.85□□□□□ -0.51
CHFR-210ENST00000535527 SCDO00767 359 aa11.85□□□□□ -0.51
CHFR-210ENST00000535527 AQP7O14520 342 aa11.85□□□□□ -0.51
CHFR-210ENST00000535527 FRS3O43559 492 aa11.85□□□□□ -0.51
CHFR-210ENST00000535527 SLC19A2O60779 497 aa11.85□□□□□ -0.51
CHFR-210ENST00000535527 DNAJA2O60884 412 aa11.85□□□□□ -0.51
CHFR-210ENST00000535527 TRAPPC6AO75865 159 aa11.85□□□□□ -0.51
CHFR-210ENST00000535527 PGM3O95394 542 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms