RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 MREGQ8N565 214 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 NATD1Q8N6N6 113 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 OR5P2Q8WZ92 322 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 ZBTB8AQ96BR9 441 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 MARK4Q96L34 752 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 BTBD2Q9BX70 525 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 OPN3Q9H1Y3 402 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 CXorf36Q9H7Y0 433 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 UBTD1Q9HAC8 227 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 PLSCR4Q9NRQ2 329 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 MED17Q9NVC6 651 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 GPATCH2Q9NW75 528 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 ELOVL5Q9NYP7 299 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 NDRG3Q9UGV2 375 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 VDAC3Q9Y277 283 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 ABCA1O95477 2261 aa9.02□□□□□ -0.97
CLSTN3-203ENST00000534830 ANK2Q01484 3957 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 DEFB108AA8MXU0 73 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 NPIPB9F8W1W9 429 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 CTIFO43310 598 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 EFNA2O43921 213 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 SOX30O94993 753 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 LINGO3P0C6S8 592 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 FPR1P21462 350 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 CRYGSP22914 178 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 LOXP28300 417 aaPredicted RBP9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 UGT2B10P36537 528 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 HPCAL1P37235 193 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 SLC6A8P48029 635 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 CCT3P49368 545 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 RPS3AP61247 264 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 RAC1P63000 192 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 FGFBP1Q14512 234 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 LASP1Q14847 261 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 SMU1Q2TAY7 513 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 ATP6AP1LQ52LC2 224 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 KLHL26Q53HC5 615 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 TNFAIP8L3Q5GJ75 292 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 CCNJQ5T5M9 372 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 IL23RQ5VWK5 629 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 FAM214BQ7L5A3 538 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 MTERF4Q7Z6M4 381 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 KRTCAP2Q8N6L1 136 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 CNEP1R1Q8N9A8 125 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 ZNF610Q8N9Z0 462 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 FBXO30Q8TB52 745 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 AGR3Q8TD06 166 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 SFXN5Q8TD22 340 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 CDS1Q92903 461 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 OTUB1Q96FW1 271 aaPredicted RBP9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 ZIM3Q96PE6 472 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 C1orf50Q9BV19 199 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 ACTRT3Q9BYD9 372 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 BHLHE41Q9C0J9 482 aaPredicted RBP9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 C20orf27Q9GZN8 174 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 ZCCHC3Q9NUD5 404 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 PAQR5Q9NXK6 330 aaPredicted RBP9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 ASIC5Q9NY37 505 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 KCNE3Q9Y6H6 103 aa9.01□□□□□ -0.97
CLSTN3-203ENST00000534830 A0A0J9YW62 118 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 SCDO00767 359 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 ITM2AO43736 263 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 GMFGO60234 142 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 SCN2BO60939 215 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 SS18L1O75177 396 aaPredicted RBP9□□□□□ -0.97
CLSTN3-203ENST00000534830 SMNDC1O75940 238 aaKnown RBP eCLIP9□□□□□ -0.97
CLSTN3-203ENST00000534830 C6orf47O95873 294 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 DHRS4L1P0CG22 281 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 G6PDP11413 515 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 FCGR2AP12318 317 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 POU2F1P14859 743 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 PRPS1L1P21108 318 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 ADH6P28332 368 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 CLDN8P56748 225 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 HBA1P69905 142 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 EMX2Q04743 252 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 KRTAP1-1Q07627 177 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 IFFO1Q0D2I5 559 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 ACKR1Q16570 336 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 LSM12Q3MHD2 195 aaKnown RBP9□□□□□ -0.97
CLSTN3-203ENST00000534830 DDX59Q5T1V6 619 aaKnown RBP eCLIP9□□□□□ -0.97
CLSTN3-203ENST00000534830 AP1ARQ63HQ0 302 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 HEPHL1Q6MZM0 1159 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 ESPNLQ6ZVH7 1005 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 SZRD1Q7Z422 152 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 WDR75Q8IWA0 830 aaKnown RBP9□□□□□ -0.97
CLSTN3-203ENST00000534830 COX18Q8N8Q8 333 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 GATSQ8NAP1 163 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 FNDC5Q8NAU1 212 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 MAPK1IP1LQ8NDC0 245 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 OR56A1Q8NGH5 318 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 OR10D3Q8NH80 312 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 B4GALNT2Q8NHY0 566 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 ZNF524Q96C55 264 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 GMPPAQ96IJ6 420 aaPredicted RBP9□□□□□ -0.97
CLSTN3-203ENST00000534830 RNF145Q96MT1 663 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 HOXD1Q9GZZ0 328 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 SSU72Q9NP77 194 aaKnown RBP9□□□□□ -0.97
CLSTN3-203ENST00000534830 ATAD3AQ9NVI7 634 aa9□□□□□ -0.97
CLSTN3-203ENST00000534830 C6orf203Q9P0P8 240 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms