RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CCDC186Q7Z3E2 898 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 SPATA19Q7Z5L4 167 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 TMEM126BQ8IUX1 230 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 AQP12AQ8IXF9 295 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 TMEM183AQ8IXX5 376 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 CENPSQ8N2Z9 138 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 BPIFB2Q8N4F0 458 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 CHCHD4Q8N4Q1 142 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 MIR7-3HGQ8N6C7 128 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 FAM86B1Q8N7N1 296 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 TEX19Q8NA77 164 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 GATSQ8NAP1 163 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 GMCL1P1Q8NEA9 526 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 NPBQ8NG41 125 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 OR9A4Q8NGU2 314 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 OR5W2Q8NH69 310 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 KIF18AQ8NI77 898 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 ZFP90Q8TF47 636 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 NDRG1Q92597 394 aaKnown RBP0.1□□□□□ -2.39
COPB1-212ENST00000534771 ESR2Q92731 530 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 GLYATL1Q969I3 302 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 RAB7BQ96AH8 199 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 VPS33AQ96AX1 596 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 BMFQ96LC9 184 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 FER1L6-AS2Q96M78 137 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 GPR137Q96N19 417 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 TAAR1Q96RJ0 339 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 TSPAN18Q96SJ8 248 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 RNF126Q9BV68 326 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 TEKT3Q9BXF9 490 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 ACPTQ9BZG2 426 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 LHX5Q9H2C1 402 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 PLGRKTQ9HBL7 147 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 FAM114A2Q9NRY5 505 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 DCAF13Q9NV06 445 aaKnown RBP0.1□□□□□ -2.39
COPB1-212ENST00000534771 C5AR2Q9P296 337 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 MBD2Q9UBB5 411 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 ZNF222Q9UK12 451 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 ASF1AQ9Y294 204 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 KLHDC2Q9Y2U9 406 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 MAD1L1Q9Y6D9 718 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 KMT2BQ9UMN6 2715 aaPredicted RBP0.09□□□□□ -2.39
COPB1-212ENST00000534771 SHROOM3Q8TF72 1996 aa0.09□□□□□ -2.39
COPB1-212ENST00000534771 FSIP2Q5CZC0 6907 aa0.09□□□□□ -2.39
COPB1-212ENST00000534771 A0A0G2JN53 185 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 A0A1W2PNN7 141 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 A0A1W2PP18 115 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 HELTA6NFD8 242 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 DNASE2O00115 360 aaPredicted RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 IFIT3O14879 490 aaKnown RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 ARPC1BO15143 372 aaKnown RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 TPD52L2O43399 206 aaKnown RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 PPIHO43447 177 aaKnown RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 EIF5BO60841 1220 aaKnown RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 TRIM3O75382 744 aaPredicted RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 GMNNO75496 209 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 CDRT1O95170 752 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 SLC16A8O95907 504 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 ADRB2P07550 413 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 APRTP07741 180 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 HMGB1P09429 215 aaKnown RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 HIST1H2AGP0C0S8 130 aaPredicted RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 LINC00869P0C866 280 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 CHTF8P0CG12 524 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 C8orf89P0DMQ9 161 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 ALPPL2P10696 532 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 ICAM2P13598 275 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 IL11P20809 199 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 EPHX2P34913 555 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 CXCL5P42830 114 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 EMDP50402 254 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 SGSHP51688 502 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 PPP5CP53041 499 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 ST8SIA6P61647 398 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 EWSR1Q01844 656 aaKnown RBP eCLIP0.09□□□□□ -2.41e-10■■■■□ 21.5
COPB1-212ENST00000534771 TNFRSF9Q07011 255 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 IL15RAQ13261 267 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 GRB7Q14451 532 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 CLPPQ16740 277 aaPredicted RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 RSPO1Q2MKA7 263 aaPredicted RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 BEND6Q5SZJ8 279 aaPredicted RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 ZNF684Q5T5D7 378 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 SLX4IPQ5VYV7 408 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 HIST2H2AA3Q6FI13 130 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 FRMPD2BQ6IN97 320 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 CWC27Q6UX04 472 aaKnown RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 DPY19L2P2Q6ZN68 376 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 RFLNAQ6ZTI6 216 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 IFNEQ86WN2 208 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 RALGPS2Q86X27 583 aaPredicted RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 ZDHHC21Q8IVQ6 265 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 MFSD6LQ8IWD5 586 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 ZNF664Q8N3J9 261 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 NKAPP1Q8N9T2 125 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 UXS1Q8NBZ7 420 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 OR1P1Q8NH06 330 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 TRUB1Q8WWH5 349 aaKnown RBP0.09□□□□□ -2.4
COPB1-212ENST00000534771 HIST1H2ACQ93077 130 aa0.09□□□□□ -2.4
COPB1-212ENST00000534771 ASB9Q96DX5 294 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms