RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ZSCAN12O43309 604 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 EMC8O43402 210 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 ERI3O43414 337 aaKnown RBP2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 TRIAP1O43715 76 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SPOPO43791 374 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 FGF17O60258 216 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 TMCC2O75069 709 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 ICOSLGO75144 302 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 EEDO75530 441 aaKnown RBP2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 KRT34O76011 436 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 JTBO76095 146 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SNX4O95219 450 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 VAPBO95292 243 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 ACTL6AO96019 429 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 APOC2P02655 101 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 IGKV3-11P04433 115 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SERPING1P05155 500 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 ABCB1P08183 1280 aaPredicted RBP2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 ZSCAN5DPP0CG00 497 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 APEHP13798 732 aaKnown RBP2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC25A16P16260 332 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 HNF1AP20823 631 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 DRD4P21917 467 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 CNTFP26441 200 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC7A1P30825 629 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 NR4A2P43354 598 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 TTPAP49638 278 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 CLDN20P56880 219 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC37A1P57057 533 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 UBASH3AP57075 661 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 DSCR9P59020 149 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 B3GALT5-AS1P59052 145 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 HERVK_113P63132 956 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 ERVK-8P63133 956 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 RGS1Q08116 209 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SPOCK1Q08629 439 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 KIF5AQ12840 1032 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 CTBP1Q13363 440 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 IQCB1Q15051 598 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 PON3Q15166 354 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 RAB35Q15286 201 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 GUSBP1Q15486 140 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 TAB1Q15750 504 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 NNATQ16517 81 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 NTRK2Q16620 822 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 ASTE1Q2TB18 679 aaPredicted RBP2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 CEP78Q5JTW2 689 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 PXDC1Q5TGL8 231 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 LRRC38Q5VT99 294 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 TRIM40Q6P9F5 258 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC2A7Q6PXP3 512 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 LCTLQ6UWM7 567 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 PPP1R21Q6ZMI0 780 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF793Q6ZN11 406 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 CENPUQ71F23 418 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC29A4Q7RTT9 530 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 VSIG1Q86XK7 387 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 MYLK4Q86YV6 388 aaPredicted RBP2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 CDKL3Q8IVW4 592 aaPredicted RBP2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 DENND6AQ8IWF6 608 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF595Q8IYB9 648 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 RCOR2Q8IZ40 523 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 TXLNBQ8N3L3 684 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC15A4Q8N697 577 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 LRRC17Q8N6Y2 441 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 PPHLN1Q8NEY8 458 aaKnown RBP2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 OR1J4Q8NGS1 313 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 OR8K3Q8NH51 312 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 OR14A16Q8NHC5 309 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 NUBPLQ8TB37 319 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 FAM216AQ8WUB2 273 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 EEF1AKMT1Q8WVE0 214 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC5A11Q8WWX8 675 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 CTNNBL1Q8WYA6 563 aaPredicted RBP2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 CCT6BQ92526 530 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 PROX1Q92786 737 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 NXNL1Q96CM4 212 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 MS4A6EQ96DS6 147 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SFXN2Q96NB2 322 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 DUX5Q96PT3 197 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 HBEGFQ99075 208 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 GPR21Q99679 349 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 ALG8Q9BVK2 526 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 C1QTNF6Q9BXI9 259 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 PINK1Q9BXM7 581 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 ERVK-6Q9BXR3 956 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 WWTR1Q9GZV5 400 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 MRPL46Q9H2W6 279 aaKnown RBP2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 EHD1Q9H4M9 534 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 LZTFL1Q9NQ48 299 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 FBXO6Q9NRD1 293 aaPredicted RBP2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 PLSCR4Q9NRQ2 329 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 FAM114A2Q9NRY5 505 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 TREX1Q9NSU2 369 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 RLIMQ9NVW2 624 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 ERVK-19Q9WJR5 959 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF337Q9Y3M9 751 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SNX13Q9Y5W8 968 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 NCKAP5O14513 1909 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 EML6Q6ZMW3 1958 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms