RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 CCL5P13501 91 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 PAICSP22234 425 aaKnown RBP18.02■□□□□ 0.47
CAPN1-226ENST00000533820 CTNNB1P35222 781 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 MRPL28Q13084 256 aaKnown RBP18.02■□□□□ 0.47
CAPN1-226ENST00000533820 ABHD17CQ6PCB6 329 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 BHLHB9Q6PI77 547 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 CD200R1LQ6Q8B3 271 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 ZNF322Q6U7Q0 402 aaPredicted RBP18.02■□□□□ 0.47
CAPN1-226ENST00000533820 CXXC5Q7LFL8 322 aaKnown RBP18.02■□□□□ 0.47
CAPN1-226ENST00000533820 SYT9Q86SS6 491 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 POGLUT1Q8NBL1 392 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 TMIEQ8NEW7 156 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 SLC35A4Q96G79 324 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 COX14Q96I36 57 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 HHIPL1Q96JK4 782 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 BTBD1Q9H0C5 482 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 PCBD2Q9H0N5 130 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 SLC6A20Q9NP91 592 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 REV3LO60673 3130 aa18.02■□□□□ 0.47
CAPN1-226ENST00000533820 E9PI62 339 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 CASC3O15234 703 aaKnown RBP18.01■□□□□ 0.47
CAPN1-226ENST00000533820 EEF1E1O43324 174 aaKnown RBP18.01■□□□□ 0.47
CAPN1-226ENST00000533820 PPM1BO75688 479 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 DDX6P26196 483 aaKnown RBP eCLIP18.01■□□□□ 0.47
CAPN1-226ENST00000533820 HLA-DMAP28067 261 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 ACVR1BP36896 505 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 RPA4Q13156 261 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 OSTF1Q92882 214 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 ELP4Q96EB1 424 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 MRPS18AQ9NVS2 196 aaKnown RBP18.01■□□□□ 0.47
CAPN1-226ENST00000533820 KLHL28Q9NXS3 571 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 ZNF624Q9P2J8 865 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-226ENST00000533820 SERGEFQ9UGK8 458 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 ZNF175Q9Y473 711 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 SEC14L5O43304 696 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 ORC5O43913 435 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 HOXD4P09016 255 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-226ENST00000533820 DUSP6Q16828 381 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 MZT2AQ6P582 158 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 CYB561A3Q8NBI2 242 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 INSL6Q9Y581 213 aa18.01■□□□□ 0.47
CAPN1-226ENST00000533820 IRGMA1A4Y4 181 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 MID1O15344 667 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 MAGEB4O15481 346 aaPredicted RBP18■□□□□ 0.47
CAPN1-226ENST00000533820 GYPBP06028 91 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 ASGR2P07307 311 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 SYPP08247 313 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 MAT2AP31153 395 aaKnown RBP18■□□□□ 0.47
CAPN1-226ENST00000533820 MPIP34949 423 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 ANXA11P50995 505 aaKnown RBP18■□□□□ 0.47
CAPN1-226ENST00000533820 GPR176Q14439 515 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 COMMD7Q86VX2 200 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 ZCCHC10Q8TBK6 192 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 ACOT11Q8WXI4 607 aaPredicted RBP18■□□□□ 0.47
CAPN1-226ENST00000533820 KIAA1143Q96AT1 154 aaPredicted RBP18■□□□□ 0.47
CAPN1-226ENST00000533820 APOBEC3BQ9UH17 382 aaKnown RBP18■□□□□ 0.47
CAPN1-226ENST00000533820 EMC8O43402 210 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 EIF4EP06730 217 aaKnown RBP18■□□□□ 0.47
CAPN1-226ENST00000533820 CLTBP09497 229 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 LINC00271P0C7V0 271 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 ATXN8OSP0DMR3 200 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 TFPIP10646 304 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 RAB28P51157 221 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 RRAS2P62070 204 aaPredicted RBP18■□□□□ 0.47
CAPN1-226ENST00000533820 ZNF620Q6ZNG0 422 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 TMPRSS9Q7Z410 1059 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 TMEFF1Q8IYR6 380 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 OR2T33Q8NG76 320 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 OR56A1Q8NGH5 318 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 OR52E1Q8NGJ3 308 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 ZNF649Q9BS31 505 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 C1QTNF6Q9BXI9 259 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 TEX12Q9BXU0 123 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 ABCG5Q9H222 651 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 UBQLN3Q9H347 655 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 SLC28A3Q9HAS3 691 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 BEX1Q9HBH7 125 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 PAK6Q9NQU5 681 aaPredicted RBP18■□□□□ 0.47
CAPN1-226ENST00000533820 CXXC1Q9P0U4 656 aaPredicted RBP18■□□□□ 0.47
CAPN1-226ENST00000533820 RASD1Q9Y272 281 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 PCDHGB7Q9Y5F8 929 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 CLUP10909 449 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 ERVK-21P61565 698 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 ADAM15Q13444 863 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 FZD5Q13467 585 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 PLCZ1Q86YW0 608 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 OR13C5Q8NGS8 318 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 PFN4Q8NHR9 129 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 OTUB2Q96DC9 234 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 SOSTQ9BQB4 213 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 ALG8Q9BVK2 526 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 WDR26Q9H7D7 661 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 DPP7Q9UHL4 492 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 ADAM29Q9UKF5 820 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 ZNF780BQ9Y6R6 833 aa18■□□□□ 0.47
CAPN1-226ENST00000533820 SZT2Q5T011 3432 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 RNGTTO60942 597 aaKnown RBP17.99■□□□□ 0.47
CAPN1-226ENST00000533820 FKTNO75072 461 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 DNAJB6O75190 326 aa17.99■□□□□ 0.47
CAPN1-226ENST00000533820 NDUFV2P19404 249 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms