RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 RAB17Q9H0T7 212 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 MRPL46Q9H2W6 279 aaKnown RBP8.19□□□□□ -1.1
NEDD8-206ENST00000531430 C12orf65Q9H3J6 166 aaKnown RBP8.19□□□□□ -1.1
NEDD8-206ENST00000531430 KLHL13Q9P2N7 655 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF225Q9UK10 706 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 GRID1Q9ULK0 1009 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 KCNS2Q9ULS6 477 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 POLR3HQ9Y535 204 aaPredicted RBP8.19□□□□□ -1.1
NEDD8-206ENST00000531430 ATP23Q9Y6H3 246 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 IGLV3-32A0A0A0MS00 114 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 A0A1W2PNR3 127 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 CCDC151A5D8V7 595 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 CCT8L1PA6NM43 557 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 A8MT66 165 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 SHISA9B4DS77 424 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF814B7Z6K7 855 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 E7EQL1 145 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 M0R1B8 84 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 GTPBP1O00178 669 aaKnown RBP8.18□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF195O14628 629 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 CRCPO75575 148 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 LY6HO94772 140 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 IGHV3-9P01782 118 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 IGHV4-31P0DP07 118 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 SLC25A16P16260 332 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 GGT1P19440 569 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 ENPP1P22413 925 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 VLDLRP98155 873 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 SLC7A5Q01650 507 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF239Q16600 458 aaKnown RBP8.18□□□□□ -1.1
NEDD8-206ENST00000531430 PLPPR5Q32ZL2 321 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 VPS26BQ4G0F5 336 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 GLE1Q53GS7 698 aaKnown RBP8.18□□□□□ -1.1
NEDD8-206ENST00000531430 FAM120AOSQ5T036 256 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 CCNJQ5T5M9 372 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 ANKRD26P1Q6NSI1 321 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 LRIG3Q6UXM1 1119 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 DNAJC14Q6Y2X3 702 aaPredicted RBP8.18□□□□□ -1.1
NEDD8-206ENST00000531430 Q6ZSR9 355 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 MUC15Q8N387 334 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 NUP43Q8NFH3 380 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 OR52N5Q8NH56 324 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 CEP70Q8NHQ1 597 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 FBXO27Q8NI29 283 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 POC1BQ8TC44 478 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 JADE3Q92613 823 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 CPNE4Q96A23 557 aaPredicted RBP8.18□□□□□ -1.1
NEDD8-206ENST00000531430 C16orf58Q96GQ5 468 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 AMDHD1Q96NU7 426 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 KCNA7Q96RP8 456 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 USB1Q9BQ65 265 aaKnown RBP8.18□□□□□ -1.1
NEDD8-206ENST00000531430 KLHDC3Q9BQ90 382 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 CBLN4Q9NTU7 201 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 GIN1Q9NXP7 522 aa8.18□□□□□ -1.1
NEDD8-206ENST00000531430 ESYT3A0FGR9 886 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 SLC35F4A4IF30 521 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 GJE1A6NN92 205 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 TRIM49D1C9J1S8 452 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 ALG1L2C9J202 215 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 AKAP10O43572 662 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 ALOX5P09917 674 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 BMP4P12644 408 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 HNF1AP20823 631 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 PSMA4P25789 261 aaKnown RBP8.17□□□□□ -1.1
NEDD8-206ENST00000531430 SLC7A1P30825 629 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 EIF1P41567 113 aaKnown RBP8.17□□□□□ -1.1
NEDD8-206ENST00000531430 PRIM2P49643 509 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 GZMKP49863 264 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 MANFP55145 182 aaKnown RBP8.17□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF763Q0D2J5 394 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 RASGEF1BQ0VAM2 473 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 FOXF1Q12946 379 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 IQCCQ4KMZ1 466 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 FAM166AQ6J272 317 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 KLHL17Q6TDP4 642 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 ZDHHC24Q6UX98 284 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 TMEM108Q6UXF1 575 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 ZAR1Q86SH2 424 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 DTX2Q86UW9 622 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 OR2L13Q8N349 312 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 CCNYL1Q8N7R7 359 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF614Q8N883 585 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 COX18Q8N8Q8 333 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.17□□□□□ -1.1
NEDD8-206ENST00000531430 ACTRT2Q8TDY3 377 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 RNF128Q8TEB7 428 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 DHRS9Q9BPW9 319 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 L2HGDHQ9H9P8 463 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 HHATLQ9HCP6 504 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 UBQLN4Q9NRR5 601 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 SH3BP4Q9P0V3 963 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 CARD8Q9Y2G2 431 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 PMF1-BGLAPU3KQ54 211 aa8.17□□□□□ -1.1
NEDD8-206ENST00000531430 NPIPA5A0A0B4J1W7 369 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 ELOA3DA6NLF2 546 aaPredicted RBP8.16□□□□□ -1.1
NEDD8-206ENST00000531430 TTC36A6NLP5 189 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 NPIPA7E9PJI5 369 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 EFNA2O43921 213 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 SEC22BO75396 215 aa8.16□□□□□ -1.1
NEDD8-206ENST00000531430 RAD51DO75771 328 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms