RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 PDSS1Q5T2R2 415 aa14.12□□□□□ -0.15
CPSF1-205ENST00000531042 HBMQ6B0K9 141 aa14.12□□□□□ -0.15
CPSF1-205ENST00000531042 MTERF4Q7Z6M4 381 aaKnown RBP14.12□□□□□ -0.15
CPSF1-205ENST00000531042 LILRA2Q8N149 483 aa14.12□□□□□ -0.15
CPSF1-205ENST00000531042 NATD1Q8N6N6 113 aa14.12□□□□□ -0.15
CPSF1-205ENST00000531042 NUDT8Q8WV74 236 aa14.12□□□□□ -0.15
CPSF1-205ENST00000531042 COQ8BQ96D53 544 aa14.12□□□□□ -0.15
CPSF1-205ENST00000531042 SMR3AQ99954 134 aa14.12□□□□□ -0.15
CPSF1-205ENST00000531042 C1orf50Q9BV19 199 aa14.12□□□□□ -0.15
CPSF1-205ENST00000531042 ACTRT3Q9BYD9 372 aa14.12□□□□□ -0.15
CPSF1-205ENST00000531042 TMEM185BQ9H7F4 350 aa14.12□□□□□ -0.15
CPSF1-205ENST00000531042 CXorf36Q9H7Y0 433 aa14.12□□□□□ -0.15
CPSF1-205ENST00000531042 ZDHHC2Q9UIJ5 367 aa14.12□□□□□ -0.15
CPSF1-205ENST00000531042 LYPLA1O75608 230 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-205ENST00000531042 INHBBP09529 407 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 PPP3CBP16298 524 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 ATP6V1C1P21283 382 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 SERPINB5P36952 375 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 EIF1P41567 113 aaKnown RBP14.11□□□□□ -0.15
CPSF1-205ENST00000531042 ZNF117Q03924 483 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 TP53BP2Q13625 1128 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 LSM12Q3MHD2 195 aaKnown RBP14.11□□□□□ -0.15
CPSF1-205ENST00000531042 KLHL26Q53HC5 615 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 IL23RQ5VWK5 629 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 STAC2Q6ZMT1 411 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 HEATR5AQ86XA9 2040 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 P3H2Q8IVL5 708 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 OR56A1Q8NGH5 318 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 PHOSPHO1Q8TCT1 267 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 ADAMTS15Q8TE58 950 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 OSTF1Q92882 214 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 KLHL15Q96M94 604 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 CCL19Q99731 98 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 ROPN1BQ9BZX4 212 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-205ENST00000531042 HOXD1Q9GZZ0 328 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 ROPN1Q9HAT0 212 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-205ENST00000531042 ATAD3AQ9NVI7 634 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 GPATCH2Q9NW75 528 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 KCNE3Q9Y6H6 103 aa14.11□□□□□ -0.15
CPSF1-205ENST00000531042 NUP214P35658 2090 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-205ENST00000531042 NPIPA5A0A0B4J1W7 369 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 NPIPA7E9PJI5 369 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 KLF4O43474 513 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 OIP5O43482 229 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 EFNA2O43921 213 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 SKAP2O75563 359 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-205ENST00000531042 SOX30O94993 753 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 C6orf47O95873 294 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 NPIPA8P0DM63 369 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 NID1P14543 1247 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 ADH6P28332 368 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 SHC1P29353 583 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 ADSLP30566 484 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-205ENST00000531042 P2RX1P51575 399 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 CARD18P57730 90 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 VSNL1P62760 191 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 IFFO1Q0D2I5 559 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 FOXF1Q12946 379 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 Q5PR19 223 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 DCST2Q5T1A1 773 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 GTF2IRD2BQ6EKJ0 949 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 CBLN3Q6UW01 205 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 C20orf204Q6ZNR8 217 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 BEND4Q6ZU67 534 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 GTF2IRD2Q86UP8 949 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 RIMKLAQ8IXN7 391 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 KRTCAP2Q8N6L1 136 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 FNDC5Q8NAU1 212 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 ZNF527Q8NB42 609 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 SFXN5Q8TD22 340 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 PRPF18Q99633 342 aaKnown RBP14.1□□□□□ -0.15
CPSF1-205ENST00000531042 FANCFQ9NPI8 374 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 ICAM5Q9UMF0 924 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 FAF1Q9UNN5 650 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-205ENST00000531042 CARD8Q9Y2G2 431 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 ACTL7BQ9Y614 415 aa14.1□□□□□ -0.15
CPSF1-205ENST00000531042 DSCAMO60469 2012 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 NPIPB9F8W1W9 429 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 NUDT14O95848 222 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 TUBBP07437 444 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 BPGMP07738 259 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 KRT16P08779 473 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 CREB1P16220 341 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 PRPS1L1P21108 318 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 ELK4P28324 431 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 AGTR1P30556 359 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 SFTPDP35247 375 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 RNF144AP50876 292 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-205ENST00000531042 ATP12AP54707 1039 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 SUMO3P55854 103 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-205ENST00000531042 LTBQ06643 244 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 SPDYE7PQ495Y7 208 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 BEX5Q5H9J7 111 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.09□□□□□ -0.152e-7■■■■■ 37.4
CPSF1-205ENST00000531042 PRSS57Q6UWY2 283 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 STK32CQ86UX6 486 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 FBXO27Q8NI29 283 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 PPP1R14CQ8TAE6 165 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 ROBO4Q8WZ75 1007 aa14.09□□□□□ -0.15
CPSF1-205ENST00000531042 MOAP1Q96BY2 351 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms