RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 STACQ99469 402 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 TTYH2Q9BSA4 534 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 PLOD3O60568 738 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 AP3S2P59780 193 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 ACTA2P62736 377 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 ACTG2P63267 376 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 LIPKQ5VXJ0 399 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 ALDH16A1Q8IZ83 802 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 CYB561A3Q8NBI2 242 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 GAL3ST1Q99999 423 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 DIABLOQ9NR28 239 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 IER3IP1Q9Y5U9 82 aa14.04□□□□□ -0.16
USP47-207ENST00000527733 OR2A25A4D2G3 310 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 FCARP24071 287 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 PDX1P52945 283 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 EEF1A1P5Q5VTE0 462 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 SAXO2Q658L1 398 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 DNAJC5GQ8N7S2 189 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 WDR77Q9BQA1 342 aaPredicted RBP14.03□□□□□ -0.16
USP47-207ENST00000527733 IRF2BPLQ9H1B7 796 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 OR52D1Q9H346 318 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 TMEM9BQ9NQ34 198 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 OLAHQ9NV23 265 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 CSNK1G3Q9Y6M4 447 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 A0A1W2PPW3 197 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 SULT2B1O00204 365 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 TMBIM6P55061 237 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 SIGLEC14Q08ET2 396 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 UBE2Q1Q7Z7E8 422 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 MISPQ8IVT2 679 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 RNF113BQ8IZP6 322 aaKnown RBP14.03□□□□□ -0.16
USP47-207ENST00000527733 LILRA2Q8N149 483 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 NKD1Q969G9 470 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 SLC25A37Q9NYZ2 338 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.03□□□□□ -0.16
USP47-207ENST00000527733 PRAMEF10O60809 474 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 DHFRP00374 187 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 BICRALQ6AI39 1079 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 LIN54Q6MZP7 749 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 RAB11FIP2Q7L804 512 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 ZER1Q7Z7L7 766 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 MEX3DQ86XN8 651 aaKnown RBP14.03□□□□□ -0.16
USP47-207ENST00000527733 ZNF100Q8IYN0 542 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 CA13Q8N1Q1 262 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 GPR137CQ8N3F9 429 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 JAGN1Q8N5M9 183 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 LINC01555Q8NAE3 123 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 STT3BQ8TCJ2 826 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 OR2A14Q96R47 310 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 SAP130Q9H0E3 1048 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 A0A075B6Q4 140 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 IDSB3KWA1 339 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 TFECO14948 347 aaPredicted RBP14.03□□□□□ -0.16
USP47-207ENST00000527733 ALPLP05186 524 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 PRR35P0CG20 571 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 DUSP5Q16690 384 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 NT5CQ8TCD5 201 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 DUSP19Q8WTR2 217 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 S1PR5Q9H228 398 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 FKBP7Q9Y680 259 aa14.03□□□□□ -0.16
USP47-207ENST00000527733 PSMD9O00233 223 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 CD22P20273 847 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 CCNOP22674 350 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 GIPRP48546 466 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 E2F2Q14209 437 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 TRAM1Q15629 374 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 NKIRAS2Q9NYR9 191 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 PAIP2BQ9ULR5 123 aaKnown RBP14.02□□□□□ -0.16
USP47-207ENST00000527733 NOX1Q9Y5S8 564 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 SEC16AO15027 2179 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 DSCR3O14972 297 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 UTS2O95399 124 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 ITGAMP11215 1152 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 SSR4P51571 173 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 PSPHP78330 225 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 TSPAN31Q12999 210 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 MAD2L1BPQ15013 274 aaPredicted RBP14.02□□□□□ -0.16
USP47-207ENST00000527733 C1orf94Q6P1W5 598 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 TMPRSS9Q7Z410 1059 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 TMEM102Q8N9M5 508 aaPredicted RBP14.02□□□□□ -0.16
USP47-207ENST00000527733 C1orf216Q8TAB5 229 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 GAB3Q8WWW8 586 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 MALT1Q9UDY8 824 aa14.02□□□□□ -0.16
USP47-207ENST00000527733 MYO10Q9HD67 2058 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 FXYD1O00168 92 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 PRODHO43272 600 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 VBP1P61758 197 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 RUNX2Q13950 521 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 ZNF404Q494X3 552 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 VWA2Q5GFL6 755 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 OR51L1Q8NGJ5 315 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 TM9SF4Q92544 642 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 EDEM2Q9BV94 578 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 SH2B3Q9UQQ2 575 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 ZNF337Q9Y3M9 751 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 TRBV4-1A0A0J9YWV2 114 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 SSNA1O43805 119 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 IDH3BO43837 385 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 PITPNAQ00169 270 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 SRYQ05066 204 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms