RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 NID1P14543 1247 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 TNFRSF1BP20333 461 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 CD247P20963 164 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 EEF1A1P68104 462 aaKnown RBP12.51□□□□□ -0.41
CD44-224ENST00000526669 MS4A2Q01362 244 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 BNIP2Q12982 314 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 SNTA1Q13424 505 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 CYBRD1Q53TN4 286 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 TBCELQ5QJ74 424 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 PGM2L1Q6PCE3 622 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 CBLN3Q6UW01 205 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 EIF3MQ7L2H7 374 aaKnown RBP12.51□□□□□ -0.41
CD44-224ENST00000526669 PACS2Q86VP3 889 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 Q8NA96 180 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 FAM98AQ8NCA5 519 aaKnown RBP12.51□□□□□ -0.41
CD44-224ENST00000526669 GPR32P1Q8NGA4 272 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 OR4K17Q8NGC6 315 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 OR1J4Q8NGS1 313 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 PNPLA2Q96AD5 504 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 TMEM41AQ96HV5 264 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 TPD52L3Q96J77 140 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 SPATA5L1Q9BVQ7 753 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 TTTY12Q9BZ98 90 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 MAGEL2Q9UJ55 1249 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 FBXL2Q9UKC9 423 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 BOKQ9UMX3 212 aaPredicted RBP12.51□□□□□ -0.41
CD44-224ENST00000526669 ZNF232Q9UNY5 417 aa12.51□□□□□ -0.41
CD44-224ENST00000526669 RP1L1Q8IWN7 2480 aaPredicted RBP12.5□□□□□ -0.41
CD44-224ENST00000526669 ZNF264O43296 627 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 RASAL1O95294 804 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 EPPINO95925 133 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 THBS1P07996 1170 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 RFPL3SP0C7P2 107 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 ERFP50548 548 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 C17orf67Q0P5P2 114 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 FOXO1Q12778 655 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 KLRB1Q12918 225 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 TRIM25Q14258 630 aaKnown RBP12.5□□□□□ -0.41
CD44-224ENST00000526669 DUSP7Q16829 419 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 AP1ARQ63HQ0 302 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 DHRS4L2Q6PKH6 230 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 VTCN1Q7Z7D3 282 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 PLCZ1Q86YW0 608 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 SPPL2CQ8IUH8 684 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 WDSUB1Q8N9V3 476 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 OR2M3Q8NG83 312 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 B4GALNT2Q8NHY0 566 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 VANGL1Q8TAA9 524 aaPredicted RBP12.5□□□□□ -0.41
CD44-224ENST00000526669 PMM1Q92871 262 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 UTP4Q969X6 686 aaKnown RBP12.5□□□□□ -0.41
CD44-224ENST00000526669 NTNG2Q96CW9 530 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 NSMCE2Q96MF7 247 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 GNRHR2Q96P88 292 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 UBL7Q96S82 380 aaPredicted RBP12.5□□□□□ -0.41
CD44-224ENST00000526669 WFDC6Q9BQY6 131 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 PINK1Q9BXM7 581 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 TSPAN10Q9H1Z9 355 aaPredicted RBP12.5□□□□□ -0.41
CD44-224ENST00000526669 ZFP64Q9NPA5 681 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 SDHAF3Q9NRP4 125 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 DNAJB12Q9NXW2 375 aaKnown RBP12.5□□□□□ -0.41
CD44-224ENST00000526669 SLC7A8Q9UHI5 535 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 SLC35A3Q9Y2D2 325 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 PCDHGB6Q9Y5F9 930 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 NBASA2RRP1 2371 aa12.5□□□□□ -0.41
CD44-224ENST00000526669 TMEM229AB2RXF0 380 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 SHISA8B8ZZ34 492 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 ANKRD65E5RJM6 399 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 M0R3H8 397 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 AP3D1O14617 1153 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 SNX4O95219 450 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 NUDT14O95848 222 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 FESP07332 822 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 SFTPCP11686 197 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 GDF1P27539 372 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 PRKAR1BP31321 381 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 RYKP34925 604 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 MAGEA5P43359 124 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 KCNJ5P48544 419 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 HOXC5Q00444 222 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 NFATC3Q12968 1075 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 SKP2Q13309 424 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 TOMM20Q15388 145 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 FXNQ16595 210 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 SPATS1Q496A3 300 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 EIPR1Q53HC9 387 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 PRR30Q53SZ7 412 aaPredicted RBP12.49□□□□□ -0.41
CD44-224ENST00000526669 RNFT1Q5M7Z0 435 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 RNF220Q5VTB9 566 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 TIGD3Q6B0B8 471 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 CBLL1Q75N03 491 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 DHFR2Q86XF0 187 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 LACC1Q8IV20 430 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 MISPQ8IVT2 679 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 FRMD6Q96NE9 622 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 TAAR6Q96RI8 345 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 LAT2Q9GZY6 243 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 DKKL1Q9UK85 242 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 SLC13A4Q9UKG4 626 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 VDAC3Q9Y277 283 aa12.49□□□□□ -0.41
CD44-224ENST00000526669 NTNG1Q9Y2I2 539 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms