RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 UTS2O95399 124 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 HSPA4LO95757 839 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 HRGP04196 525 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 CHRNGP07510 517 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 LINC00032P0C843 101 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 LAMP1P11279 417 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 PSMA4P25789 261 aaKnown RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 ARRB2P32121 409 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 NTF4P34130 210 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 CLK3P49761 638 aaKnown RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 AGFG1P52594 562 aaKnown RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 DGKQP52824 942 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 ART1P52961 327 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 MANFP55145 182 aaKnown RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 C21orf58P58505 322 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 VSNL1P62760 191 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 SRYQ05066 204 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 ZNF155Q12901 538 aaPredicted RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 ZNHIT3Q15649 155 aaPredicted RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 VPS26BQ4G0F5 336 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 ZBTB37Q5TC79 503 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 OR2A2Q6IF42 318 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 MFSD12Q6NUT3 480 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 WDR93Q6P2C0 686 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 EMBQ6PCB8 327 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 LRFN4Q6PJG9 635 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 ZNF474Q6S9Z5 364 aaPredicted RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 R3HCC1LQ7Z5L2 792 aaKnown RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 CAMKMTQ7Z624 323 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 MARCH3Q86UD3 253 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 TMEM200AQ86VY9 491 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 RIMKLAQ8IXN7 391 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 GTPBP8Q8N3Z3 284 aaPredicted RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 NATD1Q8N6N6 113 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 METTL25Q8N6Q8 603 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 SLC16A11Q8NCK7 471 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 OR4K17Q8NGC6 315 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 OR2W6PQ8NHA6 318 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 TCP10LQ8TDR4 215 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 AENQ8WTP8 325 aaKnown RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 SMPDL3BQ92485 455 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 CAVIN3Q969G5 261 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 CIDECQ96AQ7 238 aaPredicted RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 INTS12Q96CB8 462 aaKnown RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 PPCDCQ96CD2 204 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 C16orf58Q96GQ5 468 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 APOPT1Q96IL0 206 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 ADGRG7Q96K78 797 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 PPP3R2Q96LZ3 170 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 TSSK3Q96PN8 268 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 STACQ99469 402 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 PIGQQ9BRB3 760 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 GPATCH1Q9BRR8 931 aaKnown RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 RBM24Q9BX46 236 aaKnown RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 POLDIP3Q9BY77 421 aaKnown RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 LIME1Q9H400 295 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 PTGES2Q9H7Z7 377 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 RNF122Q9H9V4 155 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 EML4Q9HC35 981 aaKnown RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 SSU72Q9NP77 194 aaKnown RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 UBQLN4Q9NRR5 601 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 DUSP22Q9NRW4 184 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 SIRT3Q9NTG7 399 aaPredicted RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 SENP1Q9P0U3 644 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 PPP4R1LQ9P1A2 415 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 BAIAP2L1Q9UHR4 511 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 ZDHHC2Q9UIJ5 367 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 PACSIN3Q9UKS6 424 aa5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 RPH3AQ9Y2J0 694 aaPredicted RBP5.35□□□□□ -1.55
CCDC90B-204ENST00000525504 A0A1W2PPR1 153 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 A0A1W2PQD3 144 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 PRAMEF27A3QJZ7 478 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 SLC22A20A6NK97 555 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 SMIM23A6NLE4 172 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 TMEM114B3SHH9 223 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 TMEM233B4DJY2 109 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 NPIPB9F8W1W9 429 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 H0YC42 278 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 PIP5K1BO14986 540 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 AKAP10O43572 662 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 SCO2O43819 266 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 DNAJA2O60884 412 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 KCNH1O95259 989 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 ATE1O95260 518 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 ANGPTL1O95841 491 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 CHEK2O96017 543 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 BPGMP07738 259 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 GUSBP08236 651 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 ACP2P11117 423 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 CREB1P16220 341 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 ZNF17P17021 662 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 DDX5P17844 614 aaKnown RBP5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 HK1P19367 917 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 PRPS1L1P21108 318 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 RPL3P39023 403 aaKnown RBP5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 GDNFP39905 211 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 TPD52P55327 224 aaPredicted RBP5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 CLDN20P56880 219 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 FAM27E3Q08E93 113 aa5.34□□□□□ -1.55
CCDC90B-204ENST00000525504 HSPB3Q12988 150 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms