RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 POLKQ9UBT6 870 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 IKZF3Q9UKT9 509 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 RAB23Q9ULC3 237 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ST3GAL5Q9UNP4 418 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 RAP2CQ9Y3L5 183 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 TSC22D4Q9Y3Q8 395 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 CHST2Q9Y4C5 530 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 FADS3Q9Y5Q0 445 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 MED14O60244 1454 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 ERVK-7P63135 1459 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 CAMSAP2Q08AD1 1489 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.04□□□□□ -1.76
CD44-213ENST00000525209 RGS12O14924 1447 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 PRAG1Q86YV5 1406 aa4.04□□□□□ -1.76
CD44-213ENST00000525209 MAP3K5Q99683 1374 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 LRP6O75581 1613 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 PLXNC1O60486 1568 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 A0A1W2PP11 408 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 A0A1W2PPV9 198 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 WDR27A2RRH5 827 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 BTBD19C9JJ37 291 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 NPIPA7E9PJI5 369 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 PGRMC1O00264 195 aaKnown RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 TULP2O00295 520 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 RRHO14718 337 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 AIM2O14862 343 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 XRCC2O43543 280 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 AIREO43918 545 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 UGDHO60701 494 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 N4BP1O75113 896 aaKnown RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 ENTPD5O75356 428 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 PAPSS2O95340 614 aaPredicted RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 RAB3DO95716 219 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 IGF1P05019 195 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 NPSP0C0P6 89 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 CT62P0C5K7 136 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 NPIPA8P0DM63 369 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 MYL2P10916 166 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 PRF1P14222 555 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 ZNF43P17038 809 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 KITLGP21583 273 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 TACR3P29371 465 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 EPHX2P34913 555 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 PCK1P35558 622 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 CEACAM3P40198 252 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 AQP2P41181 271 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 P2RY1P47900 373 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 MNAT1P51948 309 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 CLDN20P56880 219 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 AP3S2P59780 193 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 MAGOHP61326 146 aaKnown RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 S100A12P80511 92 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 MRPS6P82932 125 aaKnown RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 PITPNAQ00169 270 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 REEP5Q00765 189 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 EWSR1Q01844 656 aaKnown RBP eCLIP4.03□□□□□ -1.76
CD44-213ENST00000525209 GUCY2DQ02846 1103 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 SRYQ05066 204 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 TSPAN31Q12999 210 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 ORC2Q13416 577 aaPredicted RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 CAPRIN1Q14444 709 aaKnown RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 MEF2DQ14814 521 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 SLC17A1Q14916 467 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 TRAM2Q15035 370 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 C5orf64Q2M2E5 130 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 VPS26BQ4G0F5 336 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 ACTBL2Q562R1 376 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 MTX3Q5HYI7 312 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 MARCH8Q5T0T0 291 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 KHDRBS2Q5VWX1 349 aaKnown RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 NAIF1Q69YI7 327 aaPredicted RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 OR4A47Q6IF82 309 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 LINGO4Q6UY18 593 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 TMEM184AQ6ZMB5 413 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 UTS2BQ765I0 119 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 P4HA3Q7Z4N8 544 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 MARCH9Q86YJ5 346 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 SLC13A5Q86YT5 568 aaPredicted RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 C1QL4Q86Z23 238 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 CDK20Q8IZL9 346 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 CCNYL1Q8N7R7 359 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 TTC29Q8NA56 475 aaPredicted RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 INO80EQ8NBZ0 244 aaPredicted RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 FAM98AQ8NCA5 519 aaKnown RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 CCDC197Q8NCU1 140 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 OR4A4PQ8NGN8 299 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 OR2L8Q8NGY9 312 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 RNF128Q8TEB7 428 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 ACOT11Q8WXI4 607 aaPredicted RBP4.03□□□□□ -1.76
CD44-213ENST00000525209 PIGTQ969N2 578 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 B3GALT6Q96L58 329 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 UHRF2Q96PU4 802 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 FMO2Q99518 471 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 ALOXE3Q9BYJ1 711 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 RACGAP1Q9H0H5 632 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 OR51B6Q9H340 312 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 ATP13A3Q9H7F0 1226 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 SP140LQ9H930 580 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 ACKR4Q9NPB9 350 aa4.03□□□□□ -1.76
CD44-213ENST00000525209 INPP5EQ9NRR6 644 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms