RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 RNF113BQ8IZP6 322 aaKnown RBP12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 SCAIQ8N9R8 606 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 OR2T33Q8NG76 320 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 FANK1Q8TC84 345 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 TMEM239Q8WW34 195 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 RIT1Q92963 219 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 PEX11GQ96HA9 241 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 PRSS27Q9BQR3 290 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 ZNF559Q9BR84 538 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 PCED1AQ9H1Q7 454 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 SNTG1Q9NSN8 517 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 NPAP1Q9NZP6 1156 aa12.76□□□□□ -0.37
LDLRAD3-202ENST00000524419 TMEM129A0AVI4 362 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 FOXS1O43638 330 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 NSA2O95478 260 aaKnown RBP12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 CH25HO95992 272 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 PTNP21246 168 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 CASP3P42574 277 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 RFX3P48380 749 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 GAS1P54826 345 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 WNT4P56705 351 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 RACK1P63244 317 aaKnown RBP12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 PSPHP78330 225 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 KCNJ8Q15842 424 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 LIPKQ5VXJ0 399 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 BRIX1Q8TDN6 353 aaKnown RBP12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 ASB15Q8WXK1 588 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 SLC25A46Q96AG3 418 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 TRMT61AQ96FX7 289 aaKnown RBP12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 SAMD8Q96LT4 415 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 DGAT2Q96PD7 388 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 MIR1-1HGQ9H1L0 117 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 PRTFDC1Q9NRG1 225 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 SOHLH2Q9NX45 425 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 ZNF223Q9UK11 482 aaPredicted RBP12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 PLCL2Q9UPR0 1127 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 TMEM5Q9Y2B1 443 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 CARD8Q9Y2G2 431 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 CMAHPQ9Y471 501 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 TP53BP1Q12888 1972 aaPredicted RBP12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 KNL1Q8NG31 2342 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 CEP192Q8TEP8 1941 aa12.75□□□□□ -0.37
LDLRAD3-202ENST00000524419 WWP2O00308 870 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 CLDN4O14493 209 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 CDC42EP2O14613 210 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 RGS5O15539 181 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 CTNSO60931 367 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 APOL3O95236 402 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 LYPD3O95274 346 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 GUSBP08236 651 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 S1PR1P21453 382 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 GCGRP47871 477 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 IGLV3-21P80748 117 aaPredicted RBP12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 HSDL2Q6YN16 418 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 OR8H2Q8N162 312 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 IL17RDQ8NFM7 739 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 CADM4Q8NFZ8 388 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 OR52L1Q8NGH7 329 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 RBM18Q96H35 190 aaKnown RBP12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 TGM7Q96PF1 710 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 NELL2Q99435 816 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 MED18Q9BUE0 208 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 DPH1Q9BZG8 443 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 TMEM27Q9HBJ8 222 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 TXNL4BQ9NX01 149 aaKnown RBP12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 ERVK13-1Q9NX77 482 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 PCDHGB2Q9Y5G2 931 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 V9GYH0 126 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 CUL9Q8IWT3 2517 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 TLCD2A6NGC4 264 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 TGFBR3LH3BV60 316 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 HRO43593 1189 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 TSPAN19P0C672 248 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 IFI30P13284 250 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 MAT1AQ00266 395 aaKnown RBP12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 TPBGQ13641 420 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 FAM53BQ14153 422 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 AMZ1Q400G9 498 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 PDZK1Q5T2W1 519 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 AADACL4Q5VUY2 407 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 GARNL3Q5VVW2 1013 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 ZNF613Q6PF04 617 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 ZC3H14Q6PJT7 736 aaKnown RBP12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 WDR88Q6ZMY6 472 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 ZAR1Q86SH2 424 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 LAPTM4BQ86VI4 370 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 CDK20Q8IZL9 346 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 ZNF614Q8N883 585 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 PFN4Q8NHR9 129 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 ZNF285Q96NJ3 590 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 CD180Q99467 661 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 CHRDQ9H2X0 955 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 C14orf119Q9NWQ9 140 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 TBC1D24Q9ULP9 559 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 GRIP1Q9Y3R0 1128 aa12.74□□□□□ -0.37
LDLRAD3-202ENST00000524419 COL6A3P12111 3177 aa12.73□□□□□ -0.37
LDLRAD3-202ENST00000524419 HTR3EA5X5Y0 456 aa12.73□□□□□ -0.37
LDLRAD3-202ENST00000524419 PRAMEF2O60811 474 aa12.73□□□□□ -0.37
LDLRAD3-202ENST00000524419 CDC123O75794 336 aaPredicted RBP12.73□□□□□ -0.37
LDLRAD3-202ENST00000524419 CDRT1O95170 752 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms