RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 JUNP05412 331 aaKnown RBP8.21□□□□□ -1.1
PTPN12-216ENST00000523952 MTHFD2P13995 350 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 ZNF23P17027 643 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 CD40P25942 277 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 IVDP26440 423 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 SLC7A1P30825 629 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 APOBEC3AP31941 199 aaPredicted RBP8.21□□□□□ -1.1
PTPN12-216ENST00000523952 GABRA3P34903 492 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 EIF1P41567 113 aaKnown RBP8.21□□□□□ -1.1
PTPN12-216ENST00000523952 OR3A2P47893 321 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 NCBP2P52298 156 aaKnown RBP eCLIP8.21□□□□□ -1.15e-8■■□□□ 11.5
PTPN12-216ENST00000523952 CHN2P52757 468 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 SNRPD2P62316 118 aaKnown RBP8.21□□□□□ -1.1
PTPN12-216ENST00000523952 SLC18A2Q05940 514 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 SPOCK1Q08629 439 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 RASGEF1BQ0VAM2 473 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 GALNT1Q10472 559 aaPredicted RBP8.21□□□□□ -1.1
PTPN12-216ENST00000523952 PLPPR5Q32ZL2 321 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 ARL13AQ5H913 290 aaPredicted RBP8.21□□□□□ -1.1
PTPN12-216ENST00000523952 SHQ1Q6PI26 577 aaKnown RBP8.21□□□□□ -1.1
PTPN12-216ENST00000523952 TMEM107Q6UX40 140 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 SEZ6L2Q6UXD5 910 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 SLC46A3Q7Z3Q1 461 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 CCDC91Q7Z6B0 441 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 KLHL7Q8IXQ5 586 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 PTGR2Q8N8N7 351 aaPredicted RBP8.21□□□□□ -1.1
PTPN12-216ENST00000523952 TOR1AIP2Q8NFQ8 470 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 GPR151Q8TDV0 419 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 ZNF418Q8TF45 676 aaPredicted RBP8.21□□□□□ -1.1
PTPN12-216ENST00000523952 PHF21BQ96EK2 531 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 FOXN4Q96NZ1 517 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 OSBPL9Q96SU4 736 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 SLC35C2Q9NQQ7 365 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 FARSBQ9NSD9 589 aaKnown RBP8.21□□□□□ -1.1
PTPN12-216ENST00000523952 MED17Q9NVC6 651 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 VPS29Q9UBQ0 182 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 MCM8Q9UJA3 840 aa8.21□□□□□ -1.1
PTPN12-216ENST00000523952 NUP214P35658 2090 aaPredicted RBP8.2□□□□□ -1.1
PTPN12-216ENST00000523952 IGHV3-15A0A0B4J1V0 119 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 NPIPA5A0A0B4J1W7 369 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 TCRBV9S1A1TA0A576 114 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 C7orf72A4D263 438 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 VWC2LB2RUY7 222 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 C9JVG2 144 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 NPIPA7E9PJI5 369 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 TRIM77I1YAP6 450 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 SCDO00767 359 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 PCDH7O60245 1069 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 SMIM24O75264 130 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 SEC31AO94979 1220 aaKnown RBP8.2□□□□□ -1.1
PTPN12-216ENST00000523952 SLITRK5O94991 958 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 VENTXO95231 258 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 ERCC1P07992 297 aaPredicted RBP8.2□□□□□ -1.1
PTPN12-216ENST00000523952 NPIPA8P0DM63 369 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 IGHV1-2P23083 117 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 APEX1P27695 318 aaKnown RBP8.2□□□□□ -1.1
PTPN12-216ENST00000523952 NTSP30990 170 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 TMEM176BQ3YBM2 270 aaPredicted RBP8.2□□□□□ -1.1
PTPN12-216ENST00000523952 VPS26BQ4G0F5 336 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 BLOC1S3Q6QNY0 202 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 UGT2A3Q6UWM9 527 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 C3orf62Q6ZUJ4 267 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 LINC01356Q8N9X3 169 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 OR4F6Q8NGB9 312 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 B4GALNT2Q8NHY0 566 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 ACTRT2Q8TDY3 377 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 C1QTNF6Q9BXI9 259 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 SRXN1Q9BYN0 137 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 SHCBP1LQ9BZQ2 653 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 METTL17Q9H7H0 456 aaPredicted RBP8.2□□□□□ -1.1
PTPN12-216ENST00000523952 EQTNQ9NQ60 294 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 MIEF1Q9NQG6 463 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 NTMQ9P121 344 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 DMGDHQ9UI17 866 aaKnown RBP8.2□□□□□ -1.1
PTPN12-216ENST00000523952 TMCO1Q9UM00 188 aa8.2□□□□□ -1.1
PTPN12-216ENST00000523952 A0A087WV62 115 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 GOLGA8QA0A0J9YX86 632 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 A0A1W2PR80 420 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 GOLGA8OA6NCC3 632 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 FAM159BA6NKW6 160 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 TTC36A6NLP5 189 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 E7ESA3 106 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 GOLGA8NF8WBI6 632 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 GOLGA8RI6L899 631 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 SMAD9O15198 467 aaKnown RBP8.19□□□□□ -1.1
PTPN12-216ENST00000523952 RGS14O43566 566 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 RGS9O75916 674 aaPredicted RBP8.19□□□□□ -1.1
PTPN12-216ENST00000523952 KLHL2O95198 593 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 OXSR1O95747 527 aaPredicted RBP8.19□□□□□ -1.1
PTPN12-216ENST00000523952 OTCP00480 354 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 ELK4P28324 431 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 CDC25BP30305 580 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 MANFP55145 182 aaKnown RBP8.19□□□□□ -1.1
PTPN12-216ENST00000523952 PHC1P78364 1004 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 DEFA6Q01524 100 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 ACSM2AQ08AH3 577 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 TRAF3Q13114 568 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 CALCOCO2Q13137 446 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 SLC29A2Q14542 456 aa8.19□□□□□ -1.1
PTPN12-216ENST00000523952 GGTA1PQ4G0N0 100 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms