RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 ZNF559Q9BR84 538 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 UCK2Q9BZX2 261 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 PCDHGA6Q9Y5G7 932 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 TMEM200CA6NKL6 621 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 PIP5K1CO60331 668 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 TNFAIP8O95379 198 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 SOX14O95416 240 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 COX6A1P12074 109 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 TBXA2RP21731 343 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 MMP11P24347 488 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 ELK4P28324 431 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 NRG3P56975 720 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 RPP38P78345 283 aaKnown RBP14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 FNDC7Q5VTL7 733 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 ZNF550Q7Z398 422 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 PRICKLE2Q7Z3G6 844 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 THAP5Q7Z6K1 395 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 CADM2Q8N3J6 435 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 OR5M3Q8NGP4 307 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 NUBPLQ8TB37 319 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 TP53INP1Q96A56 240 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 RTN4RQ9BZR6 473 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 ING2Q9H160 280 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 TMEM27Q9HBJ8 222 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 SCOCQ9UIL1 159 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 TCFL5Q9UL49 500 aa14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 EP300Q09472 2414 aaPredicted RBP14.19□□□□□ -0.14
CTNNA1-236ENST00000522792 C17orf51A8MQB3 221 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 FMO6PO60774 539 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 SMNDC1O75940 238 aaKnown RBP eCLIP14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 ZFAND5O76080 213 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 IGFBP1P08833 259 aaPredicted RBP14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 UBL4AP11441 157 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 CDK4P11802 303 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 OTX2P32243 289 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 IL5RAQ01344 420 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 BLMHQ13867 455 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 KIRREL2Q6UWL6 708 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 WDR88Q6ZMY6 472 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 RRM2BQ7LG56 351 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 APLFQ8IW19 511 aaPredicted RBP14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 TMCO5AQ8N6Q1 288 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 ACOT11Q8WXI4 607 aaPredicted RBP14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 GPA33Q99795 319 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 PRSS27Q9BQR3 290 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 ZNF700Q9H0M5 742 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 ANKRD19PQ9H560 264 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 AASSQ9UDR5 926 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 NDRG4Q9ULP0 352 aaKnown RBP14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 SLC35A3Q9Y2D2 325 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 CARD8Q9Y2G2 431 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 NPFFR2Q9Y5X5 522 aa14.18□□□□□ -0.14
CTNNA1-236ENST00000522792 PCNX2A6NKB5 2137 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 SDK2Q58EX2 2172 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 H3BNH8 94 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 GTPBP1O00178 669 aaKnown RBP14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 MASP2O00187 686 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 SOCS6O14544 535 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 GMFGO60234 142 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 DKK1O94907 266 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 LYPD3O95274 346 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 POU1F1P28069 291 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 CCR4P51679 360 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 PNLIPRP2P54317 469 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 KEAP1Q14145 624 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 MEP1AQ16819 746 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 ZSWIM7Q19AV6 140 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 CTU2Q2VPK5 515 aaKnown RBP14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 CBLN3Q6UW01 205 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 ASCL5Q7RTU5 278 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 MARCH3Q86UD3 253 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 OR11G2Q8NGC1 345 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 OR5L2Q8NGL0 311 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 FAM46AQ96IP4 442 aaKnown RBP14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 DGCR6LQ9BY27 220 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 POLR2J2Q9GZM3 115 aaKnown RBP14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 POLR2J3Q9H1A7 115 aaKnown RBP14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 EVA1AQ9H8M9 152 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 CNIH4Q9P003 139 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 REV1Q9UBZ9 1251 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 FARSAQ9Y285 508 aaKnown RBP14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 MYRFQ9Y2G1 1151 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 A0A1B0GWA3 101 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 SCO2O43819 266 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 ST13P50502 369 aaKnown RBP14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 FBXW4P57775 412 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 CD47Q08722 323 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 IL18R1Q13478 541 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 TMEM236Q5W0B7 351 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 C1orf94Q6P1W5 598 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 CCDC71Q8IV32 467 aaPredicted RBP14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 NRMQ8IXM6 262 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 PARP8Q8N3A8 854 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 LINC00471Q8N535 108 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 ESX1Q8N693 406 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 OR8K3Q8NH51 312 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 SH3YL1Q96HL8 342 aaPredicted RBP14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 IMMP1LQ96LU5 166 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 PITX2Q99697 317 aa14.17□□□□□ -0.14
CTNNA1-236ENST00000522792 DEFB126Q9BYW3 111 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms