RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 CAPZA1P52907 286 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 PRDX1Q06830 199 aaKnown RBP12.97□□□□□ -0.33
SYNPO-205ENST00000522122 NKG7Q16617 165 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 RFLNAQ6ZTI6 216 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 OR52E1Q8NGJ3 308 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 C7orf34Q96L11 122 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 APOOQ9BUR5 198 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 FBRSQ9HAH7 460 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 BABAM2Q9NXR7 383 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 PCDH10Q9P2E7 1040 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 RGPD3A6NKT7 1758 aaPredicted RBP12.97□□□□□ -0.33
SYNPO-205ENST00000522122 RGPD4Q7Z3J3 1758 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 GASTP01350 101 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 SFTPBP07988 381 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 ACP2P11117 423 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 DEFB110Q30KQ9 67 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 CHRFAM7AQ494W8 412 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 SLC16A12Q6ZSM3 486 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 CALHM3Q86XJ0 350 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 SLC35F2Q8IXU6 374 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 BADQ92934 168 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 TBC1D20Q96BZ9 403 aa12.97□□□□□ -0.33
SYNPO-205ENST00000522122 LOC105369274A0A096LPK9 316 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 MEGF11A6BM72 1044 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 PAHP00439 452 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 CYP17A1P05093 508 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 FBLP22087 321 aaKnown RBP12.96□□□□□ -0.33
SYNPO-205ENST00000522122 PRSS3P35030 304 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 PDX1P52945 283 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 PGGHGQ32M88 737 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 PDSS1Q5T2R2 415 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 KIF18BQ86Y91 864 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 OR4N4Q8N0Y3 316 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 OR2A12Q8NGT7 310 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 SNIP1Q8TAD8 396 aaKnown RBP12.96□□□□□ -0.33
SYNPO-205ENST00000522122 SFXN5Q8TD22 340 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 DEFB126Q9BYW3 111 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 MCCC2Q9HCC0 563 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 CUEDC1Q9NWM3 386 aaPredicted RBP12.96□□□□□ -0.33
SYNPO-205ENST00000522122 C17orf113A0A1B0GUU1 675 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 FAM183AA6NL82 134 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 GPR89AB7ZAQ6 455 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 GPR89BP0CG08 455 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 KIR2DS3Q14952 304 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 HAGHLQ6PII5 290 aaPredicted RBP12.96□□□□□ -0.33
SYNPO-205ENST00000522122 SLCO4C1Q6ZQN7 724 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 NRARPQ7Z6K4 114 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 PDZD9Q8IXQ8 264 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 CDS1Q92903 461 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 FAM46BQ96A09 425 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 TCEAL4Q96EI5 215 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 TSNAXQ99598 290 aaKnown RBP12.96□□□□□ -0.33
SYNPO-205ENST00000522122 MEPEQ9NQ76 525 aaPredicted RBP12.96□□□□□ -0.33
SYNPO-205ENST00000522122 OR6C2Q9NZP2 312 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 NEU3Q9UQ49 428 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 NUBP2Q9Y5Y2 271 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 TRBV4-1A0A0J9YWV2 114 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 FAM171A2A8MVW0 826 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 HPGDSO60760 199 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 PRSS23O95084 383 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 AMY2AP04746 511 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 HNRNPA2B1P22626 353 aaKnown RBP12.96□□□□□ -0.33
SYNPO-205ENST00000522122 CSRP3P50461 194 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 KCNJ10P78508 379 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 NKAPLQ5M9Q1 402 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 OR2G6Q5TZ20 316 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 METTL11BQ5VVY1 283 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 FAHD1Q6P587 224 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 SLC38A5Q8WUX1 472 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 MYLIPQ8WY64 445 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 PITX2Q99697 317 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 ALOXE3Q9BYJ1 711 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 ZNF304Q9HCX3 659 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 ZNF701Q9NV72 531 aaPredicted RBP12.96□□□□□ -0.33
SYNPO-205ENST00000522122 PPP4R1LQ9P1A2 415 aa12.96□□□□□ -0.33
SYNPO-205ENST00000522122 ARID1BQ8NFD5 2236 aaPredicted RBP12.96□□□□□ -0.34
SYNPO-205ENST00000522122 FER1L6Q2WGJ9 1857 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 HSPA12AO43301 675 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 PSMB5P28074 263 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 HTR2AP28223 471 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 NKX3-2P78367 333 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 CBFBQ13951 182 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 TCTE1Q5JU00 501 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 WDR45BQ5MNZ6 344 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 TMEM164Q5U3C3 297 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 OR13C3Q8NGS6 347 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 ZNF419Q96HQ0 510 aaPredicted RBP12.96□□□□□ -0.34
SYNPO-205ENST00000522122 BMFQ96LC9 184 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 DHRS1Q96LJ7 313 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 OR7D2Q96RA2 312 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 SLC22A12Q96S37 553 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 TMEFF2Q9UIK5 374 aaPredicted RBP12.96□□□□□ -0.34
SYNPO-205ENST00000522122 ZNF225Q9UK10 706 aa12.96□□□□□ -0.34
SYNPO-205ENST00000522122 NAP1L6A6NFF2 107 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 ALG10Q5BKT4 473 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 FAM198BQ6UWH4 519 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 RNF165Q6ZSG1 346 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 LMNTD1Q8N9Z9 388 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 HAVCR2Q8TDQ0 301 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 CNOT9Q92600 299 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms