RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-213	ENST00000519553	MCHR1	Q99705	422 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	CITED1	Q99966	193 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	CNPY3	Q9BT09	278 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	PTGES2	Q9H7Z7	377 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	IGHV1OR15-1	A0A075B7D0	117 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	IGHV7-81	A0A0B4J1V7	117 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	OR6C65	A6NJZ3	312 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	STX7	O15400	261 aa	Known RBP	4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	ZNF861P	O60384	105 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	SCGB2A1	O75556	95 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	TIMP1	P01033	207 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	IGLV1-47	P01700	117 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	IGF1	P05019	195 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	GCFC2	P16383	781 aa	Known RBP	4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	MAGEA5	P43359	124 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	KIR2DS2	P43631	304 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	ZNF45	Q02386	682 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	IL17A	Q16552	155 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	IL34	Q6ZMJ4	242 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	ZBTB44	Q8NCP5	570 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	NEIL2	Q969S2	332 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	DHX33	Q9H6R0	707 aa	Known RBP	4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	ASB8	Q9H765	288 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	WRAP73	Q9P2S5	460 aa	Predicted RBP	4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	MAB21L2	Q9Y586	359 aa		4.11	□□□□□ -1.75
PTPN12-213	ENST00000519553	SMIM28	A0A1B0GU29	152 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	TUBAL3	A6NHL2	446 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	EMC8	O43402	210 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	TBL1X	O60907	577 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	B3GAT3	O94766	335 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	OR8U8	P0C7N1	319 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	CYP2F1	P24903	491 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	GCK	P35557	465 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	WNT4	P56705	351 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	BPIFB3	P59826	476 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	CKAP4	Q07065	602 aa	Known RBP	4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	LAGE3	Q14657	143 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	HERPUD1	Q15011	391 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	MAPK6	Q16659	721 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	ASPHD2	Q6ICH7	369 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	ACSM5	Q6NUN0	579 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	ZNF589	Q86UQ0	364 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	ERI1	Q8IV48	349 aa	Known RBP	4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	AKR1E2	Q96JD6	320 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	SMIM14	Q96QK8	99 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	TXN2	Q99757	166 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	DUSP16	Q9BY84	665 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	GSDMC	Q9BYG8	508 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	CHIA	Q9BZP6	476 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	FANCF	Q9NPI8	374 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	SMC3	Q9UQE7	1217 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553		U3KQV3	271 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	SPACA6	W5XKT8	324 aa		4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN12-213	ENST00000519553	PP2D1	A8MPX8	630 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553		H3BMQ9	156 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	CTAGE5	O15320	804 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	MBD3	O95983	291 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	F10	P00742	488 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	IGHV3-48	P01763	117 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	CLU	P10909	449 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	MGMT	P16455	207 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	PSG7	Q13046	419 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	SCGB2A2	Q13296	93 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	INA	Q16352	499 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	NDUFA9	Q16795	377 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	TMEM17	Q86X19	198 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	CELF6	Q96J87	481 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	CYP2S1	Q96SQ9	504 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	RNF126	Q9BV68	326 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	OR51J1	Q9H342	316 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	TAS2R3	Q9NYW6	316 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	ANGPTL2	Q9UKU9	493 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553	WDR45	Q9Y484	360 aa		4.09	□□□□□ -1.75
PTPN12-213	ENST00000519553		A0A087WZY1	265 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	MEGF6	O75095	1541 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	FUT3	P21217	361 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	KIF5B	P33176	963 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	CD86	P42081	329 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	RIPK4	P57078	832 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	CARMIL1	Q5VZK9	1371 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	FAM199X	Q6PEV8	388 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	DPY19L4	Q7Z388	723 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	FAHD2A	Q96GK7	314 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	OR5B2	Q96R09	309 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	NICN1	Q9BSH3	213 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	WDR76	Q9H967	626 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	MARCH5	Q9NX47	278 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	ARHGAP23	Q9P227	1491 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	RPS6KB2	Q9UBS0	482 aa		4.08	□□□□□ -1.76
PTPN12-213	ENST00000519553	PPIAL4C	A0A0B4J2A2	164 aa		4.07	□□□□□ -1.76
PTPN12-213	ENST00000519553	CLDN5	O00501	218 aa		4.07	□□□□□ -1.76
PTPN12-213	ENST00000519553	FCN1	O00602	326 aa		4.07	□□□□□ -1.76
PTPN12-213	ENST00000519553	PPIAL4G	P0DN37	164 aa		4.07	□□□□□ -1.76
PTPN12-213	ENST00000519553	TPSB2	P20231	275 aa		4.07	□□□□□ -1.76
PTPN12-213	ENST00000519553	SERPINA2	P20848	420 aa		4.07	□□□□□ -1.76
PTPN12-213	ENST00000519553	DLST	P36957	453 aa		4.07	□□□□□ -1.76

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