RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 EFCAB1Q9HAE3 211 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 CARD8Q9Y2G2 431 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 SLC6A5Q9Y345 797 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 L3MBTL1Q9Y468 752 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 DSPPQ9NZW4 1301 aa20.51■□□□□ 0.87
SKP1-206ENST00000519321 ZNF407Q9C0G0 2248 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 FIGNL2A6NMB9 653 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 SLC6A2P23975 617 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 PER3P56645 1201 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 MTPNP58546 118 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 KCNJ10P78508 379 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 CDK6Q00534 326 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 CAPRIN1Q14444 709 aaKnown RBP20.5■□□□□ 0.87
SKP1-206ENST00000519321 SF3B4Q15427 424 aaKnown RBP eCLIP20.5■□□□□ 0.877e-7■■■■□ 21.6
SKP1-206ENST00000519321 GXYLT1Q4G148 440 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 C1QL3Q5VWW1 255 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 NANOGP8Q6NSW7 305 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 MTFR2Q6P444 385 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 DOLPP1Q86YN1 238 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 TREML1Q86YW5 311 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 PM20D2Q8IYS1 436 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 POU5F2Q8N7G0 328 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 MAL2Q969L2 176 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 ZBTB8AQ96BR9 441 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 RCN3Q96D15 328 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 ZG16BQ96DA0 208 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 SPATA9Q9BWV2 254 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 KAT8Q9H7Z6 458 aaKnown RBP20.5■□□□□ 0.87
SKP1-206ENST00000519321 NANOGQ9H9S0 305 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 ICAM5Q9UMF0 924 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 ZNF232Q9UNY5 417 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 IFT52Q9Y366 437 aa20.5■□□□□ 0.87
SKP1-206ENST00000519321 LRRTM2O43300 516 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 GMFGO60234 142 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 WDR1O75083 606 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 NUDT14O95848 222 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 HOXD4P09016 255 aaPredicted RBP20.49■□□□□ 0.87
SKP1-206ENST00000519321 ETS2P15036 469 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 BMP7P18075 431 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 RPS4Y1P22090 263 aaKnown RBP20.49■□□□□ 0.87
SKP1-206ENST00000519321 GFRA1P56159 465 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 CRYZQ08257 329 aaKnown RBP20.49■□□□□ 0.87
SKP1-206ENST00000519321 GTF3C1Q12789 2109 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 LARS2Q15031 903 aaKnown RBP20.49■□□□□ 0.87
SKP1-206ENST00000519321 CYP51A1Q16850 503 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 RAET1LQ5VY80 246 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 REEP3Q6NUK4 255 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 ARPINQ7Z6K5 226 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 SERPINA11Q86U17 422 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 SLC30A8Q8IWU4 369 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 FAM26EQ8N5C1 309 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 TMCO5AQ8N6Q1 288 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 C11orf65Q8NCR3 313 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 OR52P1PQ8NH57 321 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 ARSGQ96EG1 525 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 TIMP4Q99727 224 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 UGT2B28Q9BY64 529 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 QRSL1Q9H0R6 528 aaKnown RBP20.49■□□□□ 0.87
SKP1-206ENST00000519321 ARMC7Q9H6L4 198 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 TINAGQ9UJW2 476 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 RPH3AQ9Y2J0 694 aaPredicted RBP20.49■□□□□ 0.87
SKP1-206ENST00000519321 AP3M1Q9Y2T2 418 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 DNAJC13O75165 2243 aa20.49■□□□□ 0.87
SKP1-206ENST00000519321 FREM3P0C091 2139 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 CENPVL1A0A0U1RR11 272 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 FXYD1O00168 92 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 ZNHIT1O43257 154 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 PGM3O95394 542 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 THBS1P07996 1170 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 ESRRAP11474 423 aaPredicted RBP20.48■□□□□ 0.87
SKP1-206ENST00000519321 NID1P14543 1247 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 GABRA1P14867 456 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 ZNF17P17021 662 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 PTGER4P35408 488 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 PGM1P36871 562 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 EIF1P41567 113 aaKnown RBP20.48■□□□□ 0.87
SKP1-206ENST00000519321 SKP2Q13309 424 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 CBFBQ13951 182 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 SCARB2Q14108 478 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 LIN52Q52LA3 116 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 CBLN3Q6UW01 205 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 KRT73Q86Y46 540 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 C10orf111Q8N326 155 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 CCDC197Q8NCU1 140 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 HIPK4Q8NE63 616 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 FAM71CQ8NEG0 241 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 OR5W2Q8NH69 310 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 ECSITQ9BQ95 431 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 SPATA5L1Q9BVQ7 753 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 PRDM14Q9GZV8 571 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 EXOSC3Q9NQT5 275 aaKnown RBP20.48■□□□□ 0.87
SKP1-206ENST00000519321 MED17Q9NVC6 651 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 STOML1Q9UBI4 398 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 SH3BGRL2Q9UJC5 107 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 ANGPT4Q9Y264 503 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 VDAC3Q9Y277 283 aa20.48■□□□□ 0.87
SKP1-206ENST00000519321 C7orf72A4D263 438 aa20.47■□□□□ 0.87
SKP1-206ENST00000519321 E9PLN8 166 aa20.47■□□□□ 0.87
SKP1-206ENST00000519321 CCL21O00585 134 aa20.47■□□□□ 0.87
SKP1-206ENST00000519321 AIM2O14862 343 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms